Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Creating pull request for 10.21105.joss.04654 #3594

Merged
merged 7 commits into from
Oct 9, 2022
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
257 changes: 257 additions & 0 deletions joss.04654/10.21105.joss.04654.crossref.xml
Original file line number Diff line number Diff line change
@@ -0,0 +1,257 @@
<?xml version="1.0" encoding="UTF-8"?>
<doi_batch xmlns="http://www.crossref.org/schema/5.3.1"
xmlns:ai="http://www.crossref.org/AccessIndicators.xsd"
xmlns:rel="http://www.crossref.org/relations.xsd"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
version="5.3.1"
xsi:schemaLocation="http://www.crossref.org/schema/5.3.1 http://www.crossref.org/schemas/crossref5.3.1.xsd">
<head>
<doi_batch_id>20221009T081411-3a5d28627f55dbe6c94ccef6d595b615a8a2a0d5</doi_batch_id>
<timestamp>20221009081411</timestamp>
<depositor>
<depositor_name>JOSS Admin</depositor_name>
<email_address>[email protected]</email_address>
</depositor>
<registrant>The Open Journal</registrant>
</head>
<body>
<journal>
<journal_metadata>
<full_title>Journal of Open Source Software</full_title>
<abbrev_title>JOSS</abbrev_title>
<issn media_type="electronic">2475-9066</issn>
<doi_data>
<doi>10.21105/joss</doi>
<resource>https://joss.theoj.org/</resource>
</doi_data>
</journal_metadata>
<journal_issue>
<publication_date media_type="online">
<month>10</month>
<year>2022</year>
</publication_date>
<journal_volume>
<volume>7</volume>
</journal_volume>
<issue>78</issue>
</journal_issue>
<journal_article publication_type="full_text">
<titles>
<title>Nanomesh: A Python workflow tool for generating meshes
from image data</title>
</titles>
<contributors>
<person_name sequence="first" contributor_role="author">
<given_name>Stef</given_name>
<surname>Smeets</surname>
<ORCID>https://orcid.org/0000-0002-5413-9038</ORCID>
</person_name>
<person_name sequence="additional"
contributor_role="author">
<given_name>Nicolas</given_name>
<surname>Renaud</surname>
<ORCID>https://orcid.org/0000-0001-9589-2694</ORCID>
</person_name>
<person_name sequence="additional"
contributor_role="author">
<given_name>Lars J. Corbijn</given_name>
<surname>van Willenswaard</surname>
<ORCID>https://orcid.org/0000-0001-6554-1527</ORCID>
</person_name>
</contributors>
<publication_date>
<month>10</month>
<day>09</day>
<year>2022</year>
</publication_date>
<pages>
<first_page>4654</first_page>
</pages>
<publisher_item>
<identifier id_type="doi">10.21105/joss.04654</identifier>
</publisher_item>
<ai:program name="AccessIndicators">
<ai:license_ref applies_to="vor">http://creativecommons.org/licenses/by/4.0/</ai:license_ref>
<ai:license_ref applies_to="am">http://creativecommons.org/licenses/by/4.0/</ai:license_ref>
<ai:license_ref applies_to="tdm">http://creativecommons.org/licenses/by/4.0/</ai:license_ref>
</ai:program>
<rel:program>
<rel:related_item>
<rel:description>Software archive</rel:description>
<rel:inter_work_relation relationship-type="references" identifier-type="doi">10.5281/zenodo.7157382</rel:inter_work_relation>
</rel:related_item>
<rel:related_item>
<rel:description>GitHub review issue</rel:description>
<rel:inter_work_relation relationship-type="hasReview" identifier-type="uri">https://github.com/openjournals/joss-reviews/issues/4654</rel:inter_work_relation>
</rel:related_item>
</rel:program>
<doi_data>
<doi>10.21105/joss.04654</doi>
<resource>https://joss.theoj.org/papers/10.21105/joss.04654</resource>
<collection property="text-mining">
<item>
<resource mime_type="application/pdf">https://joss.theoj.org/papers/10.21105/joss.04654.pdf</resource>
</item>
</collection>
</doi_data>
<citation_list>
<citation key="centaur">
<volume_title>CENTAUR software</volume_title>
<unstructured_citation>CENTAUR software. (n.d.). [Computer
software]. https://centaursoft.com</unstructured_citation>
</citation>
<citation key="scanip">
<volume_title>Simpleware ScanIP</volume_title>
<author>Simpleware</author>
<unstructured_citation>Simpleware. (n.d.). Simpleware
ScanIP.
https://www.synopsys.com/simpleware/software/scanip.html</unstructured_citation>
</citation>
<citation key="gmsh">
<volume_title>Gmsh</volume_title>
<author>Geuzaine, Christophe and Remacle,
Jean-Francois</author>
<cYear>2020</cYear>
<unstructured_citation>Geuzaine, Christophe and Remacle,
Jean-Francois. (2020). Gmsh (Version 4.6.0) [Computer software].
http://http://gmsh.info/</unstructured_citation>
</citation>
<citation key="cgal">
<volume_title>CGAL user and reference manual</volume_title>
<author>The CGAL Project</author>
<cYear>2013</cYear>
<unstructured_citation>The CGAL Project. (2013). CGAL user
and reference manual (4.3 ed.). CGAL Editorial Board.
http://doc.cgal.org/4.3/Manual/packages.html</unstructured_citation>
</citation>
<citation key="tetgen">
<article_title>TetGen, a delaunay-based quality tetrahedral
mesh generator</article_title>
<author>Si</author>
<journal_title>ACM Trans. Math. Softw.</journal_title>
<issue>2</issue>
<volume>41</volume>
<doi>10.1145/2629697</doi>
<issn>0098-3500</issn>
<cYear>2015</cYear>
<unstructured_citation>Si, H. (2015). TetGen, a
delaunay-based quality tetrahedral mesh generator. ACM Trans. Math.
Softw., 41(2). https://doi.org/10.1145/2629697</unstructured_citation>
</citation>
<citation key="pyvista">
<article_title>PyVista: 3D plotting and mesh analysis
through a streamlined interface for the visualization toolkit
(VTK)</article_title>
<author>Sullivan</author>
<journal_title>Journal of Open Source
Software</journal_title>
<issue>37</issue>
<volume>4</volume>
<doi>10.21105/joss.01450</doi>
<cYear>2019</cYear>
<unstructured_citation>Sullivan, C. B., &amp; Kaszynski, A.
(2019). PyVista: 3D plotting and mesh analysis through a streamlined
interface for the visualization toolkit (VTK). Journal of Open Source
Software, 4(37), 1450.
https://doi.org/10.21105/joss.01450</unstructured_citation>
</citation>
<citation key="triangle">
<article_title>Triangle: Engineering a 2D quality mesh
generator and delaunay triangulator</article_title>
<author>Shewchuk</author>
<journal_title>Applied computational geometry towards
geometric engineering</journal_title>
<doi>10.1007/bfb0014497</doi>
<isbn>978-3-540-70680-9</isbn>
<cYear>1996</cYear>
<unstructured_citation>Shewchuk, J. R. (1996). Triangle:
Engineering a 2D quality mesh generator and delaunay triangulator. In M.
C. Lin &amp; D. Manocha (Eds.), Applied computational geometry towards
geometric engineering (pp. 203–222). Springer Berlin Heidelberg.
https://doi.org/10.1007/bfb0014497</unstructured_citation>
</citation>
<citation key="meshio">
<volume_title>meshio: Tools for mesh files</volume_title>
<author>Schlömer</author>
<doi>10.5281/zenodo.1173115</doi>
<unstructured_citation>Schlömer, N. (n.d.). meshio: Tools
for mesh files.
https://doi.org/10.5281/zenodo.1173115</unstructured_citation>
</citation>
<citation key="numpy">
<article_title>Array programming with NumPy</article_title>
<author>Harris</author>
<journal_title>Nature</journal_title>
<issue>7825</issue>
<volume>585</volume>
<doi>10.1038/s41586-020-2649-2</doi>
<cYear>2020</cYear>
<unstructured_citation>Harris, C. R., Millman, K. J., Walt,
S. J. van der, Gommers, R., Virtanen, P., Cournapeau, D., Wieser, E.,
Taylor, J., Berg, S., Smith, N. J., Kern, R., Picus, M., Hoyer, S.,
Kerkwijk, M. H. van, Brett, M., Haldane, A., Río, J. F. del, Wiebe, M.,
Peterson, P., … Oliphant, T. E. (2020). Array programming with NumPy.
Nature, 585(7825), 357–362.
https://doi.org/10.1038/s41586-020-2649-2</unstructured_citation>
</citation>
<citation key="skimage">
<article_title>Scikit-image: Image processing in
python</article_title>
<author>Van der Walt</author>
<journal_title>PeerJ</journal_title>
<volume>2</volume>
<doi>10.7717/peerj.453</doi>
<cYear>2014</cYear>
<unstructured_citation>Van der Walt, S., Schönberger, J. L.,
Nunez-Iglesias, J., Boulogne, F., Warner, J. D., Yager, N., Gouillart,
E., &amp; Yu, T. (2014). Scikit-image: Image processing in python.
PeerJ, 2, e453.
https://doi.org/10.7717/peerj.453</unstructured_citation>
</citation>
<citation key="Hughes2005">
<article_title>Extrinsic optical scattering loss in photonic
crystal waveguides: Role of fabrication disorder and photon group
velocity</article_title>
<author>Hughes</author>
<journal_title>Phys. Rev. Lett.</journal_title>
<volume>94</volume>
<doi>10.1103/PhysRevLett.94.033903</doi>
<cYear>2005</cYear>
<unstructured_citation>Hughes, S., Ramunno, L., Young, J.
F., &amp; Sipe, J. E. (2005). Extrinsic optical scattering loss in
photonic crystal waveguides: Role of fabrication disorder and photon
group velocity. Phys. Rev. Lett., 94, 033903.
https://doi.org/10.1103/PhysRevLett.94.033903</unstructured_citation>
</citation>
<citation key="Koenderink2005">
<article_title>Optical extinction due to intrinsic
structural variations of photonic crystals</article_title>
<author>Koenderink</author>
<journal_title>Phys. Rev. B</journal_title>
<volume>72</volume>
<doi>10.1103/PhysRevB.72.153102</doi>
<cYear>2005</cYear>
<unstructured_citation>Koenderink, A. F., Lagendijk, A.,
&amp; Vos, W. L. (2005). Optical extinction due to intrinsic structural
variations of photonic crystals. Phys. Rev. B, 72, 153102.
https://doi.org/10.1103/PhysRevB.72.153102</unstructured_citation>
</citation>
<citation key="Li1993">
<article_title>Minimum cross entropy
thresholding</article_title>
<author>Li</author>
<journal_title>Pattern Recognition</journal_title>
<issue>4</issue>
<volume>26</volume>
<doi>10.1016/0031-3203(93)90115-D</doi>
<issn>0031-3203</issn>
<cYear>1993</cYear>
<unstructured_citation>Li, C. H., &amp; Lee, C. K. (1993).
Minimum cross entropy thresholding. Pattern Recognition, 26(4), 617–625.
https://doi.org/10.1016/0031-3203(93)90115-D</unstructured_citation>
</citation>
</citation_list>
</journal_article>
</journal>
</body>
</doi_batch>
Loading