Merge branch 'release/24.10' into feature/use-cache-axes #639
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| name: Automated CI testing | |
| # This workflow run automatically for every commit on github it checks the syntax and launch the tests. | |
| # | grep . | uniq -c filters out empty lines and then groups consecutive lines together with the number of occurrences | |
| on: | |
| push: | |
| workflow_dispatch: | |
| inputs: | |
| comment: | |
| description: Just a simple comment to know the purpose of the manual build | |
| required: false | |
| jobs: | |
| ci_assembly: | |
| runs-on: ubuntu-20.04 | |
| services: | |
| mssql: | |
| image: mcr.microsoft.com/mssql/server:2017-latest | |
| env: | |
| ACCEPT_EULA: Y | |
| SA_PASSWORD: GitHub999 | |
| ports: | |
| - 1433:1433 | |
| # this health-cmd needed because the mssql container does not provide a health check | |
| options: >- | |
| --health-interval=10s | |
| --health-timeout=5s | |
| --health-start-period=10s | |
| --health-retries=10 | |
| --health-cmd="/opt/mssql-tools/bin/sqlcmd -S localhost -U sa -P ${SA_PASSWORD} -Q 'SELECT 1' || exit 1" | |
| pgsql: | |
| image: postgres | |
| env: | |
| DB_HOST: localhost | |
| DB_PORT: 5432 | |
| POSTGRES_DB: imis | |
| POSTGRES_USER: postgres | |
| POSTGRES_PASSWORD: GitHub999 | |
| ports: | |
| - 5432:5432 | |
| options: >- | |
| --health-cmd pg_isready | |
| --health-interval 10s | |
| --health-timeout 5s | |
| --health-retries 10 | |
| opensearch: | |
| image: opensearchproject/opensearch:latest | |
| ports: | |
| - 9200:9200 | |
| env: | |
| discovery.type: single-node | |
| cluster.name: my_opensearch_local | |
| http.port: 9200 | |
| plugins.security.ssl.http.enabled: false | |
| OPENSEARCH_INITIAL_ADMIN_PASSWORD: B9wc9VrqX7pY | |
| options: >- | |
| --health-cmd "curl -f -u admin:${OPENSEARCH_INITIAL_ADMIN_PASSWORD} http://localhost:9200/_cluster/health || exit 1" | |
| --health-interval 10s | |
| --health-timeout 5s | |
| --health-retries 10 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.10 | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.10" | |
| - name: Cache dependencies | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.cache/pip | |
| key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements.txt') }} | |
| restore-keys: | | |
| ${{ runner.os }}-pip-${{ hashFiles('**/requirements.txt') }} | |
| ${{ runner.os }}-pip- | |
| ${{ runner.os }}- | |
| - name: Install Python dependencies | |
| working-directory: ./script | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install jq | |
| python -m pip install --upgrade pip | |
| pip install -r ../requirements.txt | |
| python modules-requirements.py ../openimis.json > modules-requirements.txt | |
| pip install --no-cache-dir -r modules-requirements.txt | |
| export MODULES=$(jq -r '(.modules[].name)' openimis.json | xargs) | |
| echo $modules | |
| - name: Environment info | |
| run: | | |
| pip list | |
| - name: Initialize PSQL | |
| run: | | |
| export DB_NAME_TEST="test_$DB_NAME" | |
| if [ ${GITHUB_REF##*/} = "main" ]; then export DBBRANCH="main"; else export DBBRANCH="develop"; fi | |
| echo "Branch ${GITHUB_REF##*/}, usign ${DBBRANCH} branch for database" | |
| git clone --depth=1 --branch=$DBBRANCH https://github.com/openimis/database_postgresql.git ./sql_psql | |
| echo 'set search_path to public' >> ~/.psqlrc | |
| PGPASSWORD=GitHub999 psql -U $DB_USER -h $DB_HOST -c "DROP DATABASE IF EXISTS \"$DB_NAME_TEST\";" | |
| PGPASSWORD=GitHub999 psql -U $DB_USER -h $DB_HOST -c "CREATE DATABASE \"$DB_NAME_TEST\";" | |
| PGPASSWORD=GitHub999 psql -U $DB_USER -h $DB_HOST -d $DB_NAME_TEST -f ./sql_psql/database\ scripts/00_dump.sql | grep . | uniq -c | |
| PGPASSWORD=GitHub999 psql -U $DB_USER -h $DB_HOST -d $DB_NAME_TEST -f ./sql_psql/database\ scripts/02_aux_functions.sql | grep . | uniq -c | |
| PGPASSWORD=GitHub999 psql -U $DB_USER -h $DB_HOST -d $DB_NAME_TEST -f ./sql_psql/database\ scripts/03_views.sql | grep . | uniq -c | |
| PGPASSWORD=GitHub999 psql -U $DB_USER -h $DB_HOST -d $DB_NAME_TEST -f ./sql_psql/database\ scripts/04_functions.sql | grep . | uniq -c | |
| PGPASSWORD=GitHub999 psql -U $DB_USER -h $DB_HOST -d $DB_NAME_TEST -f ./sql_psql/database\ scripts/05_stored_procs.sql | grep . | uniq -c | |
| PGPASSWORD=GitHub999 psql -U $DB_USER -h $DB_HOST -d $DB_NAME_TEST -f ./sql_psql/database\ scripts/demo_db.sql | grep . | uniq -c | |
| env: | |
| DB_HOST: localhost | |
| DB_PORT: 5432 | |
| DB_NAME: imis | |
| DB_USER: postgres | |
| DB_PASSWORD: GitHub999 | |
| - name: Initialize MSSQL | |
| run: | | |
| export DB_NAME_TEST="test_$DB_NAME" | |
| if [ ${GITHUB_REF##*/} = "main" ]; then export DBBRANCH="main"; else export DBBRANCH="develop"; fi | |
| echo "Branch ${GITHUB_REF##*/}, usign ${DBBRANCH} branch for database" | |
| git clone --depth=1 --branch=$DBBRANCH https://github.com/openimis/database_ms_sqlserver.git ./sql_mssql | |
| cd sql_mssql/ && bash concatenate_files.sh && cd .. | |
| curl https://packages.microsoft.com/keys/microsoft.asc | sudo apt-key add - | |
| curl https://packages.microsoft.com/config/ubuntu/20.04/prod.list | sudo tee /etc/apt/sources.list.d/msprod.list | |
| sudo apt-get update | |
| sudo apt-get install mssql-tools unixodbc-dev | |
| #Main db has to exists for tests to run correctly, psql container creates empty main db by default | |
| /opt/mssql-tools/bin/sqlcmd -S $DB_HOST -U $DB_USER -P $DB_PASSWORD -Q "DROP DATABASE IF EXISTS $DB_NAME" | |
| /opt/mssql-tools/bin/sqlcmd -S $DB_HOST -U $DB_USER -P $DB_PASSWORD -Q "CREATE DATABASE $DB_NAME" | |
| /opt/mssql-tools/bin/sqlcmd -S $DB_HOST -U $DB_USER -P $DB_PASSWORD -Q "DROP DATABASE IF EXISTS $DB_NAME_TEST" | |
| /opt/mssql-tools/bin/sqlcmd -S $DB_HOST -U $DB_USER -P $DB_PASSWORD -Q "CREATE DATABASE $DB_NAME_TEST" | |
| /opt/mssql-tools/bin/sqlcmd -S $DB_HOST -U $DB_USER -P $DB_PASSWORD -d $DB_NAME_TEST -i ./sql_mssql/output/fullDemoDatabase.sql | grep . | uniq -c | |
| env: | |
| DB_HOST: localhost | |
| DB_PORT: 1433 | |
| DB_NAME: imis | |
| DB_USER: sa | |
| DB_PASSWORD: GitHub999 | |
| - name: Django tests PSQL | |
| working-directory: ./openIMIS | |
| # Run the tests regardless if previous steps failed (if setup fails the tests should crash instantly) | |
| if: success() || failure() | |
| run: | | |
| python -V | |
| export MODULES=$(jq -r '(.modules[].name)' ../openimis.json | xargs) | |
| MODULES=$(echo "$MODULES" | sed -E "s/\b$(echo "${CI_EXCLUDED_MODULE// /\\b|\\b}")\b/ /g" | xargs) | |
| echo $MODULES | |
| python manage.py test --keepdb $MODULES | |
| env: | |
| SECRET_KEY: secret | |
| MODE: DEV | |
| DB_DEFAULT: postgresql | |
| CELERY_BROKER_URL: "memory://openIMIS-test//" | |
| CELERY_RESULT_BACKEND: "cache+memory://openIMIS-test//" | |
| #DJANGO_SETTINGS_MODULE: hat.settings | |
| DB_HOST: localhost | |
| DB_PORT: 5432 | |
| DB_NAME: imis | |
| DB_USER: postgres | |
| DB_PASSWORD: GitHub999 | |
| #DEV_SERVER: true | |
| SITE_ROOT: api | |
| CI_EXCLUDED_MODULE: ${{ vars.CI_EXCLUDED_MODULE }} | |
| OPENSEARCH_ADMIN: admin | |
| OPENSEARCH_PASSWORD: B9wc9VrqX7pY | |
| OPEN_SEARCH_HTTP_PORT: 9200 | |
| OPENSEARCH_HOSTS: "localhost:9200" | |
| - name: Django tests MSSQL | |
| working-directory: ./openIMIS | |
| # Run the tests regardless if previous steps failed (if setup fails the tests should crash instantly) | |
| if: success() || failure() | |
| run: | | |
| python -V | |
| export MODULES=$(jq -r '(.modules[].name)' ../openimis.json | xargs) | |
| MODULES=$(echo "$MODULES" | sed -E "s/\b$(echo "${CI_EXCLUDED_MODULE// /\\b|\\b}")\b/ /g" | xargs) | |
| echo $MODULES | |
| python manage.py test --debug-mode --timing --keepdb $MODULES | |
| env: | |
| SECRET_KEY: secret | |
| MODE: DEV | |
| DB_DEFAULT: mssql | |
| CELERY_BROKER_URL: "memory://openIMIS-test//" | |
| CELERY_RESULT_BACKEND: "cache+memory://openIMIS-test//" | |
| #DJANGO_SETTINGS_MODULE: hat.settings | |
| DB_HOST: localhost | |
| DB_PORT: 1433 | |
| DB_NAME: imis | |
| DB_USER: sa | |
| DB_PASSWORD: GitHub999 | |
| #DEV_SERVER: true | |
| SITE_ROOT: api | |
| #REMOTE_USER_AUTHENTICATION: False | |
| CI_EXCLUDED_MODULE: ${{ vars.CI_EXCLUDED_MODULE }} | |
| OPENSEARCH_ADMIN: admin | |
| OPENSEARCH_PASSWORD: B9wc9VrqX7pY | |
| OPEN_SEARCH_HTTP_PORT: 9200 | |
| OPENSEARCH_HOSTS: "localhost:9200" |