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[part 7 of 12] A07 - unsorted UBERON terms (medullaryReticularFormation - ophthalmicPlexus) #227

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@@ -0,0 +1,15 @@
{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/MeissnersCorpuscle",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is a mechanoreceptor. [auto-generated from 'is_a' property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0012450)]",
"description": "A type of nerve ending in the skin that is responsible for sensitivity to light touch. In particular, they have highest sensitivity (lowest threshold) when sensing vibrations lower than 50 Hertz. They are rapidly adaptive receptors. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0012450)]",
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0012450#meissner-s-corpuscle",
"name": "Meissner's corpuscle",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0012450",
"synonym": null
}

Original file line number Diff line number Diff line change
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{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/MeyersLoopOfOpticRadiation",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is a radiation of cerebral hemisphere. Is part of the optic radiation. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0035935) ('is_a' and 'relationship')]",
"description": "Part of the optic radiation which sweeps back on itself into the temporal lobe, just lateral to the temporal horn of the lateral ventricle.. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0035935)]",
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0035935#meyer-s-loop-of-optic-radiation",
"name": "Meyer's loop of optic radiation",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0035935",
"synonym": [
"inferior optic radiation",
"Meyer's loop"
]
}

Original file line number Diff line number Diff line change
Expand Up @@ -4,21 +4,19 @@
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/medullaryReticularFormation",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "'Medullary reticular formation' is a nuclear complex of neuraxis and gray matter of hindbrain. It is part of the medulla oblongata and reticular formation.",
"description": "Part of reticular formation located in the medulla",
"definition": "Is a nuclear complex of neuraxis and gray matter of hindbrain. Is part of the medulla oblongata and the reticular formation. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002559) ('is_a' and 'relationship')]",
"description": "The reticular formation is a series of brain nuclei located in the medulla oblongata. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002559)]",
"interlexIdentifier": "http://uri.interlex.org/base/ilx_0106744",
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0002559#medullary-reticular-formation-1",
"name": "medullary reticular formation",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0002559",
"synonym": [
"bulb reticular formation",
"bulbar reticular formation",
"formatio reticularis myelencephali",
"medulla oblongata reticular formation",
"medulla oblonmgata reticular formation",
"medullary reticular nucleus",
"metepencephalon reticular formation",
"reticular formation",
"reticular formation of bulb",
"reticular formation of medulla",
"reticular formation of medulla oblongata",
Expand All @@ -27,3 +25,4 @@
"rhombencephalic reticular formation"
]
}

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{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/meningealCluster",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is an anatomical entity. Is part of the central nervous system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0010743) ('is_a' and 'relationship')]",
"description": "The collection of all meningeal layers that line a central nervous system. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0010743)]",
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0010743#meningeal-cluster",
"name": "meningeal cluster",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0010743",
"synonym": [
"cerebral meninges",
"cluster of meninges",
"meninges"
]
}

18 changes: 18 additions & 0 deletions instances/latest/terminologies/UBERONParcellation/meninx.jsonld
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{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/meninx",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is part of the meningeal cluster. [auto-generated from 'relationship' property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002360)]",
"description": "Membrane organ that surrounds the brain and the spinal cord. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002360)]",
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0002360#meninx-1",
"name": "meninx",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0002360",
"synonym": [
"layer of meninges",
"meningeal layer"
]
}

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Expand Up @@ -4,11 +4,16 @@
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/meninxOfHindbrain",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "'Meninx of hindbrain' is a brain meninx. It is part of the hindbrain.",
"description": null,
"definition": "Is a brain meninx. Is part of the hindbrain. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003291) ('is_a' and 'relationship')]",
"description": "A meninx that is part of a hindbrain. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003291)]",
"interlexIdentifier": "http://uri.interlex.org/base/ilx_0736366",
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0003291#meninx-of-hindbrain",
"name": "meninx of hindbrain",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0003291",
"synonym": null
"synonym": [
"hindbrain meninges",
"hindbrain meninx",
"meninges of hindbrain"
]
}

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{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/meninxOfMidbrain",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is a brain meninx. Is part of the midbrain. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003288) ('is_a' and 'relationship')]",
"description": "A meninx that is part of a midbrain. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003288)]",
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0003288#meninx-of-midbrain",
"name": "meninx of midbrain",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0003288",
"synonym": [
"midbrain meninx"
]
}

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{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/mesentericPlexus",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is an autonomic nerve plexus. [auto-generated from 'is_a' property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0035771)]",
"description": null,
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0035771#mesenteric-plexus",
"name": "mesenteric plexus",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0035771",
"synonym": null
}

17 changes: 17 additions & 0 deletions instances/latest/terminologies/UBERONParcellation/mesomere1.jsonld
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{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/mesomere1",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is a midbrain neuromere. [auto-generated from 'is_a' property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0019272)]",
"description": null,
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0019272#mesomere-1",
"name": "mesomere 1",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0019272",
"synonym": [
"mesomere M1"
]
}

18 changes: 18 additions & 0 deletions instances/latest/terminologies/UBERONParcellation/mesomere2.jsonld
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{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/mesomere2",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is a midbrain neuromere. [auto-generated from 'is_a' property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0019274)]",
"description": null,
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0019274#mesomere-2",
"name": "mesomere 2",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0019274",
"synonym": [
"mesomere 2 (preisthmus or caudal midbrain)",
"mesomere M2"
]
}

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{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/mesopallium",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is a regional part of brain. Is part of the pallium. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0007349) ('is_a' and 'relationship')]",
"description": null,
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0007349#mesopallium",
"name": "mesopallium",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0007349",
"synonym": null
}

Original file line number Diff line number Diff line change
Expand Up @@ -4,19 +4,16 @@
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/metathalamus",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "'Metathalamus' is a nucleus of dorsal thalamus.",
"description": "The metathalamus is a composite structure of the thalamus, consisting of the medial geniculate nucleus and the lateral geniculate nucleus. [WP,unvetted].",
"definition": "Is a nucleus of dorsal thalamus. [auto-generated from 'is_a' property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002704)]",
"description": "The metathalamus is a composite structure of the thalamus, consisting of the medial geniculate nucleus and the lateral geniculate nucleus. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002704)]",
"interlexIdentifier": "http://uri.interlex.org/base/ilx_0106839",
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0002704#metathalamus-1",
"name": "metathalamus",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0002704",
"synonym": [
"corpora geniculata",
"geniculate group of dorsal thalamus",
"geniculate group of the dorsal thalamus",
"geniculate thalamic group",
"geniculate thalamic nuclear group (metathalamus)",
"MTh",
"nuclei metathalami"
]
}

Original file line number Diff line number Diff line change
Expand Up @@ -4,14 +4,12 @@
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/midbrain",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "'Midbrain' is a regional part of brain.",
"description": "Part of the brain that develops from the middle of the 3 primary vesicles of the embryonic neural tube, between the prosencephalon and rhombencephalon, later forming the tectum and cerebral peduncles. (CSP)",
"definition": "Is a regional part of brain. [auto-generated from 'is_a' property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0001891)]",
"description": "The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles). [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0001891)]",
"interlexIdentifier": "http://uri.interlex.org/base/ilx_0106935",
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0001891#midbrain-1",
"name": "midbrain",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0001891",
"synonym": [
"MB",
"Mesencephalon"
]
"synonym": null
}

Original file line number Diff line number Diff line change
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{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/midbrainBasalPlate",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is a gray matter. Is part of the midbrain mantle layer. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0010285) ('is_a' and 'relationship')]",
"description": "Portion of tissue that is dorsolateral to the floor plate and part of the midbrain. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0010285)]",
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0010285#midbrain-basal-plate",
"name": "midbrain basal plate",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0010285",
"synonym": [
"basal plate midbrain",
"basal plate midbrain region"
]
}

Original file line number Diff line number Diff line change
Expand Up @@ -4,29 +4,27 @@
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/midbrainCerebralAqueduct",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "'Midbrain cerebral aqueduct' is a brain ventricle. It is part of the midbrain.",
"description": "Part of ventricular system of brain consisting of a narrow channel in the midbrain connecting the third and fourth ventricles. (Maryann Martone)",
"definition": "Is a brain ventricle. Is part of the midbrain. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002289) ('is_a' and 'relationship')]",
"description": "Part of ventricular system of brain consisting of a narrow channel in the midbrain connecting the third and fourth ventricles. (Maryann Martone) [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002289)]",
"interlexIdentifier": "http://uri.interlex.org/base/ilx_0101977",
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0002289#cerebral-aqueduct",
"name": "midbrain cerebral aqueduct",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0002289",
"synonym": [
"aqueduct",
"Aqueduct (Sylvius)",
"aqueduct (Sylvius)",
"aqueduct of midbrain",
"aqueduct of Sylvius",
"aqueductus mesencephali",
"cerebral aquaduct",
"cerebral aqueduct",
"Cerebral aqueduct of Sylvius",
"cerebral aqueduct proper",
"cerebral aqueduct of Sylvius",
"medial tectal ventricle",
"mesencephalic duct",
"mesencephalic ventricle",
"mesencephalic vesicle",
"midbrain cerebral aqueduct",
"midbrain ventricle",
"Sylvian aqueduct",
"tectal ventricle"
]
}

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{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/midbrainNeuromere",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is a neuromere. [auto-generated from 'is_a' property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0014776)]",
"description": "A neuromere that is part of the presumptive midbrain. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0014776)]",
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0014776#midbrain-neuromere",
"name": "midbrain neuromere",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0014776",
"synonym": [
"mesomere of nervous system",
"neuromere of mesomere group"
]
}

Original file line number Diff line number Diff line change
Expand Up @@ -4,19 +4,15 @@
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/midbrainReticularFormation",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "'Midbrain reticular formation' is a nuclear complex of neuraxis and gray matter of midbrain. It is part of the midbrain tegmentum and reticular formation.",
"description": "Part of the reticular formation located in the midbrain tegmentum",
"definition": "Is a nuclear complex of neuraxis and gray matter of midbrain. Is part of the midbrain tegmentum and the reticular formation. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002639) ('is_a' and 'relationship')]",
"description": "Part of the reticular formation located in the midbrain tegmentum. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002639)]",
"interlexIdentifier": "http://uri.interlex.org/base/ilx_0106943",
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0002639#midbrain-reticular-formation-1",
"name": "midbrain reticular formation",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0002639",
"synonym": [
"formatio reticularis mesencephali",
"formatio reticularis tegmentalis",
"formatio reticularis tegmenti mesencephali",
"MBRF",
"reticular formation of midbrain",
"substantia reticularis mesencephali",
"tegmental reticular formation"
]
}

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{
"@context": {
"@vocab": "https://openminds.om-i.org/props/"
},
"@id": "https://openminds.om-i.org/instances/UBERONParcellation/midbrainSubarachnoidSpace",
"@type": "https://openminds.om-i.org/types/UBERONParcellation",
"definition": "Is a subarachnoid space. Is part of the midbrain. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0005217) ('is_a' and 'relationship')]",
"description": "A subarachnoid space that is part of a midbrain. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0005217)]",
"interlexIdentifier": null,
"knowledgeSpaceLink": "https://knowledge-space.org/wiki/UBERON:0005217#midbrain-subarachnoid-space",
"name": "midbrain subarachnoid space",
"preferredOntologyIdentifier": "http://purl.obolibrary.org/obo/UBERON_0005217",
"synonym": [
"subarachnoid space midbrain"
]
}

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