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Add PyMySQL instrumentor support for sqlcommenting #2942

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Nov 21, 2024
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224a771
WIP
tammy-baylis-swi Oct 9, 2024
3c43604
Add _DB_DRIVER_ALIASES
tammy-baylis-swi Oct 9, 2024
cec3a86
Add mysql_client_version to sqlcomment
tammy-baylis-swi Oct 9, 2024
47cdaa9
lint
tammy-baylis-swi Oct 9, 2024
b9335f0
Fix existing tests
tammy-baylis-swi Oct 9, 2024
881f4af
lint test
tammy-baylis-swi Oct 9, 2024
b0a9efd
Add PyMySQL dbapi commenter case
tammy-baylis-swi Oct 9, 2024
4dd9f73
Add test
tammy-baylis-swi Oct 10, 2024
d56eb21
Add test
tammy-baylis-swi Oct 10, 2024
385ea6c
Add test
tammy-baylis-swi Oct 10, 2024
52430b5
Add tests
tammy-baylis-swi Oct 10, 2024
98ee019
Changelog
tammy-baylis-swi Oct 11, 2024
b9fbc50
Merge branch 'main' into sqlcommenting-mysql-driver
tammy-baylis-swi Oct 11, 2024
8e4cb08
calculate_commenter_data at init of DatabaseApiIntegration
tammy-baylis-swi Oct 11, 2024
8755339
Merge branch 'main' into sqlcommenting-mysql-driver
tammy-baylis-swi Oct 15, 2024
4e6ab3f
try-except if NoneType module
tammy-baylis-swi Oct 16, 2024
ea17a2a
Add pymysql sqlcomment support
tammy-baylis-swi Oct 16, 2024
408dc1b
Add unit tests
tammy-baylis-swi Oct 17, 2024
690bc9a
Update docstring
tammy-baylis-swi Oct 17, 2024
6707226
Merge branch 'main' into pymysql-sqlcomment
tammy-baylis-swi Oct 30, 2024
3a48f5e
Changelog
tammy-baylis-swi Oct 30, 2024
dec459b
Merge branch 'main' into pymysql-sqlcomment
tammy-baylis-swi Oct 31, 2024
2759bd2
Merge branch 'main' into pymysql-sqlcomment
tammy-baylis-swi Nov 6, 2024
ca54886
Merge branch 'main' into pymysql-sqlcomment
tammy-baylis-swi Nov 19, 2024
04d4b61
Merge branch 'main' into pymysql-sqlcomment
tammy-baylis-swi Nov 19, 2024
aacc68c
Merge branch 'main' into pymysql-sqlcomment
tammy-baylis-swi Nov 20, 2024
8e50f8b
pymysql instrument_connection specifies connect_module
tammy-baylis-swi Nov 20, 2024
501b7bd
lint
tammy-baylis-swi Nov 20, 2024
0987233
Add tests
tammy-baylis-swi Nov 20, 2024
761076a
Fix doc
tammy-baylis-swi Nov 20, 2024
94b0d3c
Merge branch 'main' into pymysql-sqlcomment
xrmx Nov 21, 2024
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2 changes: 2 additions & 0 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -54,6 +54,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
([#2635](https://github.com/open-telemetry/opentelemetry-python-contrib/pull/2635))
- `opentelemetry-instrumentation` Add support for string based dotted module paths in unwrap
([#2919](https://github.com/open-telemetry/opentelemetry-python-contrib/pull/2919))
- `opentelemetry-instrumentation-pymysql` Add sqlcommenter support
([#2942](https://github.com/open-telemetry/opentelemetry-python-contrib/pull/2942))

### Fixed

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -26,7 +26,6 @@
import pymysql
from opentelemetry.instrumentation.pymysql import PyMySQLInstrumentor


PyMySQLInstrumentor().instrument()

cnx = pymysql.connect(database="MySQL_Database")
Expand All @@ -36,6 +35,76 @@
cursor.close()
cnx.close()

SQLCOMMENTER
*****************************************
You can optionally configure PyMySQL instrumentation to enable sqlcommenter which enriches
the query with contextual information.

Usage
-----

.. code:: python

import pymysql
from opentelemetry.instrumentation.pymysql import PyMySQLInstrumentor

PyMySQLInstrumentor().instrument(enable_commenter=True, commenter_options={})

cnx = pymysql.connect(database="MySQL_Database")
cursor = cnx.cursor()
cursor.execute("INSERT INTO test (testField) VALUES (123)"
cnx.commit()
cursor.close()
cnx.close()


For example,
::

Invoking cursor.execute("INSERT INTO test (testField) VALUES (123)") will lead to sql query "INSERT INTO test (testField) VALUES (123)" but when SQLCommenter is enabled
the query will get appended with some configurable tags like "INSERT INTO test (testField) VALUES (123) /*tag=value*/;"


SQLCommenter Configurations
***************************
We can configure the tags to be appended to the sqlquery log by adding configuration inside commenter_options(default:{}) keyword

db_driver = True(Default) or False

For example,
::
Enabling this flag will add pymysql and its version, e.g. /*pymysql%%3A1.2.3*/

dbapi_threadsafety = True(Default) or False

For example,
::
Enabling this flag will add threadsafety /*dbapi_threadsafety=2*/

dbapi_level = True(Default) or False

For example,
::
Enabling this flag will add dbapi_level /*dbapi_level='2.0'*/

mysql_client_version = True(Default) or False

For example,
::
Enabling this flag will add mysql_client_version /*mysql_client_version='123'*/

driver_paramstyle = True(Default) or False

For example,
::
Enabling this flag will add driver_paramstyle /*driver_paramstyle='pyformat'*/

opentelemetry_values = True(Default) or False

For example,
::
Enabling this flag will add traceparent values /*traceparent='00-03afa25236b8cd948fa853d67038ac79-405ff022e8247c46-01'*/

API
---
"""
Expand All @@ -59,14 +128,16 @@


class PyMySQLInstrumentor(BaseInstrumentor):
def instrumentation_dependencies(self) -> Collection[str]:
def instrumentation_dependencies(self) -> Collection[str]: # pylint: disable=no-self-use
return _instruments

def _instrument(self, **kwargs):
def _instrument(self, **kwargs): # pylint: disable=no-self-use
"""Integrate with the PyMySQL library.
https://github.com/PyMySQL/PyMySQL/
"""
tracer_provider = kwargs.get("tracer_provider")
enable_sqlcommenter = kwargs.get("enable_commenter", False)
commenter_options = kwargs.get("commenter_options", {})

dbapi.wrap_connect(
__name__,
Expand All @@ -76,14 +147,21 @@ def _instrument(self, **kwargs):
_CONNECTION_ATTRIBUTES,
version=__version__,
tracer_provider=tracer_provider,
enable_commenter=enable_sqlcommenter,
commenter_options=commenter_options,
)

def _uninstrument(self, **kwargs):
def _uninstrument(self, **kwargs): # pylint: disable=no-self-use
""" "Disable PyMySQL instrumentation"""
dbapi.unwrap_connect(pymysql, "connect")

@staticmethod
def instrument_connection(connection, tracer_provider=None):
def instrument_connection(
connection,
tracer_provider=None,
enable_commenter=None,
commenter_options=None,
):
"""Enable instrumentation in a PyMySQL connection.

Args:
Expand All @@ -102,6 +180,9 @@ def instrument_connection(connection, tracer_provider=None):
_CONNECTION_ATTRIBUTES,
version=__version__,
tracer_provider=tracer_provider,
enable_commenter=enable_commenter,
commenter_options=commenter_options,
connect_module=pymysql,
)

@staticmethod
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -24,6 +24,7 @@


class TestPyMysqlIntegration(TestBase):
# pylint: disable=invalid-name
def tearDown(self):
super().tearDown()
with self.disable_logging():
Expand Down Expand Up @@ -111,6 +112,244 @@ def test_instrument_connection(self, mock_connect):
spans_list = self.memory_exporter.get_finished_spans()
self.assertEqual(len(spans_list), 1)

@mock.patch("opentelemetry.instrumentation.dbapi.instrument_connection")
@mock.patch("pymysql.connect")
# pylint: disable=unused-argument
def test_instrument_connection_enable_commenter_dbapi_kwargs(
self,
mock_connect,
mock_instrument_connection,
):
cnx = pymysql.connect(database="test")
cnx = PyMySQLInstrumentor().instrument_connection(
cnx,
enable_commenter=True,
commenter_options={"foo": True},
)
cursor = cnx.cursor()
cursor.execute("SELECT * FROM test")
kwargs = mock_instrument_connection.call_args[1]
self.assertEqual(kwargs["enable_commenter"], True)
self.assertEqual(kwargs["commenter_options"], {"foo": True})

def test_instrument_connection_with_dbapi_sqlcomment_enabled(self):
mock_connect_module = mock.MagicMock(
__name__="pymysql",
__version__="foobar",
threadsafety="123",
apilevel="123",
paramstyle="test",
)
mock_connect_module.get_client_info.return_value = "foobaz"
mock_cursor = mock_connect_module.connect().cursor()
mock_connection = mock.MagicMock()
mock_connection.cursor.return_value = mock_cursor

with mock.patch(
"opentelemetry.instrumentation.pymysql.pymysql",
mock_connect_module,
):
cnx_proxy = PyMySQLInstrumentor().instrument_connection(
mock_connection,
enable_commenter=True,
)
cnx_proxy.cursor().execute("Select 1;")

spans_list = self.memory_exporter.get_finished_spans()
span = spans_list[0]
span_id = format(span.get_span_context().span_id, "016x")
trace_id = format(span.get_span_context().trace_id, "032x")
self.assertEqual(
mock_cursor.execute.call_args[0][0],
f"Select 1 /*db_driver='pymysql%%3Afoobar',dbapi_level='123',dbapi_threadsafety='123',driver_paramstyle='test',mysql_client_version='foobaz',traceparent='00-{trace_id}-{span_id}-01'*/;",
)

def test_instrument_connection_with_dbapi_sqlcomment_enabled_with_options(
self,
):
mock_connect_module = mock.MagicMock(
__name__="pymysql",
__version__="foobar",
threadsafety="123",
apilevel="123",
paramstyle="test",
)
mock_connect_module.get_client_info.return_value = "foobaz"
mock_cursor = mock_connect_module.connect().cursor()
mock_connection = mock.MagicMock()
mock_connection.cursor.return_value = mock_cursor

with mock.patch(
"opentelemetry.instrumentation.pymysql.pymysql",
mock_connect_module,
):
cnx_proxy = PyMySQLInstrumentor().instrument_connection(
mock_connection,
enable_commenter=True,
commenter_options={
"dbapi_level": False,
"dbapi_threadsafety": True,
"driver_paramstyle": False,
},
)
cnx_proxy.cursor().execute("Select 1;")

spans_list = self.memory_exporter.get_finished_spans()
span = spans_list[0]
span_id = format(span.get_span_context().span_id, "016x")
trace_id = format(span.get_span_context().trace_id, "032x")
self.assertEqual(
mock_cursor.execute.call_args[0][0],
f"Select 1 /*db_driver='pymysql%%3Afoobar',dbapi_threadsafety='123',mysql_client_version='foobaz',traceparent='00-{trace_id}-{span_id}-01'*/;",
)

def test_instrument_connection_with_dbapi_sqlcomment_not_enabled_default(
self,
):
mock_connect_module = mock.MagicMock(
__name__="pymysql",
__version__="foobar",
threadsafety="123",
apilevel="123",
paramstyle="test",
)
mock_connect_module.get_client_info.return_value = "foobaz"
mock_cursor = mock_connect_module.connect().cursor()
mock_connection = mock.MagicMock()
mock_connection.cursor.return_value = mock_cursor

with mock.patch(
"opentelemetry.instrumentation.pymysql.pymysql",
mock_connect_module,
):
cnx_proxy = PyMySQLInstrumentor().instrument_connection(
mock_connection,
)
cnx_proxy.cursor().execute("Select 1;")
self.assertEqual(
mock_cursor.execute.call_args[0][0],
"Select 1;",
)

@mock.patch("opentelemetry.instrumentation.dbapi.wrap_connect")
@mock.patch("pymysql.connect")
# pylint: disable=unused-argument
def test_instrument_enable_commenter_dbapi_kwargs(
self,
mock_connect,
mock_wrap_connect,
):
PyMySQLInstrumentor()._instrument(
enable_commenter=True,
commenter_options={"foo": True},
)
kwargs = mock_wrap_connect.call_args[1]
self.assertEqual(kwargs["enable_commenter"], True)
self.assertEqual(kwargs["commenter_options"], {"foo": True})

def test_instrument_with_dbapi_sqlcomment_enabled(
self,
):
mock_connect_module = mock.MagicMock(
__name__="pymysql",
__version__="foobar",
threadsafety="123",
apilevel="123",
paramstyle="test",
)
mock_connect_module.get_client_info.return_value = "foobaz"
mock_cursor = mock_connect_module.connect().cursor()
mock_connection = mock.MagicMock()
mock_connection.cursor.return_value = mock_cursor

with mock.patch(
"opentelemetry.instrumentation.pymysql.pymysql",
mock_connect_module,
):
PyMySQLInstrumentor()._instrument(
enable_commenter=True,
)
cnx = mock_connect_module.connect(database="test")
cursor = cnx.cursor()
cursor.execute("Select 1;")

spans_list = self.memory_exporter.get_finished_spans()
span = spans_list[0]
span_id = format(span.get_span_context().span_id, "016x")
trace_id = format(span.get_span_context().trace_id, "032x")
self.assertEqual(
mock_cursor.execute.call_args[0][0],
f"Select 1 /*db_driver='pymysql%%3Afoobar',dbapi_level='123',dbapi_threadsafety='123',driver_paramstyle='test',mysql_client_version='foobaz',traceparent='00-{trace_id}-{span_id}-01'*/;",
)

def test_instrument_with_dbapi_sqlcomment_enabled_with_options(
self,
):
mock_connect_module = mock.MagicMock(
__name__="pymysql",
__version__="foobar",
threadsafety="123",
apilevel="123",
paramstyle="test",
)
mock_connect_module.get_client_info.return_value = "foobaz"
mock_cursor = mock_connect_module.connect().cursor()
mock_connection = mock.MagicMock()
mock_connection.cursor.return_value = mock_cursor

with mock.patch(
"opentelemetry.instrumentation.pymysql.pymysql",
mock_connect_module,
):
PyMySQLInstrumentor()._instrument(
enable_commenter=True,
commenter_options={
"dbapi_level": False,
"dbapi_threadsafety": True,
"driver_paramstyle": False,
},
)
cnx = mock_connect_module.connect(database="test")
cursor = cnx.cursor()
cursor.execute("Select 1;")

spans_list = self.memory_exporter.get_finished_spans()
span = spans_list[0]
span_id = format(span.get_span_context().span_id, "016x")
trace_id = format(span.get_span_context().trace_id, "032x")
self.assertEqual(
mock_cursor.execute.call_args[0][0],
f"Select 1 /*db_driver='pymysql%%3Afoobar',dbapi_threadsafety='123',mysql_client_version='foobaz',traceparent='00-{trace_id}-{span_id}-01'*/;",
)

def test_instrument_with_dbapi_sqlcomment_not_enabled_default(
self,
):
mock_connect_module = mock.MagicMock(
__name__="pymysql",
__version__="foobar",
threadsafety="123",
apilevel="123",
paramstyle="test",
)
mock_connect_module.get_client_info.return_value = "foobaz"
mock_cursor = mock_connect_module.connect().cursor()
mock_connection = mock.MagicMock()
mock_connection.cursor.return_value = mock_cursor

with mock.patch(
"opentelemetry.instrumentation.pymysql.pymysql",
mock_connect_module,
):
PyMySQLInstrumentor()._instrument()
cnx = mock_connect_module.connect(database="test")
cursor = cnx.cursor()
cursor.execute("Select 1;")
self.assertEqual(
mock_cursor.execute.call_args[0][0],
"Select 1;",
)

@mock.patch("pymysql.connect")
# pylint: disable=unused-argument
def test_uninstrument_connection(self, mock_connect):
Expand Down