MPAI broken with OpenMPI 3.0.1, pmix-1.2.5 and intel compiler

[knjmooney]

I've compiled OpenMPI v3.0.1 with the following configure line

./configure CC=icc CXX=icpc FC=ifort --prefix=/path/to/mpi-dir --with-pmix=/path/to/pmix --with-libevent=external --with-hwloc=/path/to/hwloc/1.11.10

I've reduced the problem to the following

 -> mpicc hello.c -o hello -g
 -> gdb --args mpirun -n 1 hello
GNU gdb (GDB) Red Hat Enterprise Linux 7.6.1-51.el7
(gdb-starter) start
(gdb-starter) set MPIR_being_debugged=1
(gdb-starter) continue

With pmix-1.2.5, the process hangs and I see the following message ORTE_ERROR_LOG: Not supported in file orted/pmix/pmix_server_gen.c at line 362. With pmix-2.1.1 the program runs to completion.

I've attached bug_info.tar.gz which contains the output of ompi_info --all and cat config.log for both compilation of OpenMPI 3.0.1 with pmix-1.2.5 and pmix-2.1.1. It also contains hello.c.

I don't know if the issue is specific to the intel compiler but I was unable to configure with an external pmix and the gnu compiler.

[ggouaillardet]

are you saying pmix 1.2.5 does not work but pmix 2.1.1 does work ?

[ggouaillardet]

note Open MPI 3.0.2 has been released, so I encourage you to upgrade to the latest version in order to get the latest bug fixes.

[knjmooney]

Yes, it does work with pmix 2.1.1 but does not work with pmix 1.2.5. Sorry if that wasn't clear. I will verify if the issue exists with OpenMPI v3.0.2.

…

On Tue, 12 Jun 2018, 00:41 Gilles Gouaillardet, ***@***.***> wrote: note Open MPI 3.0.2 has been released, so I encourage you to upgrade to the latest version in order to get the latest bug fixes. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#5260 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/ATEcL_EtEgDyYylQqHJ7fz-YiUQxPdGUks5t7wAcgaJpZM4UiraT> .

[knjmooney]

I've reproduced the above issue with OpenMPI 3.0.2 and 3.1.0 using PMIx 1.2.5.

I'd also like to add I'm using Intel Compiler 18.2.

[rhc54]

Related to #5501

[jsquyres]

Hey @rhc54 -- is this fixed in Open MPI 3.1.x HEAD (which has PMIx 2.1.3)?

[rhc54]

I suspect it will work as the user indicated that OMPI 3.x works fine with PMIx v2.1.x - it is the older PMIx v1.2.x that isn't compatible. I doubt that anyone is going to fix that problem.

[jsquyres]

A few questions:

1. Just curious: what is MPAI?
2. @rhc54 Is the problem solely in PMIx? Put differently: is it possible for OMPI to abort/exit in this known-bad scenario?

Additionally: how do we document this kind of stuff to the user? (i.e., OMPI / external PMIX compatibility -- does that reduce to https://docs.google.com/spreadsheets/d/1SwkUEzbFb1TvKuwHzOnPgjkW6OhmGmt1yrH3YN2IUQw/edit#gid=497420864, and does that need to be communicated to the user community somehow?

[knjmooney]

I can answer 1. MPAI is the MPIR Process Acquisition Interface. It allows tools to locate jobs by debugging the starter process. I think I've seen most people refer to it as MPIR but I was reading the following at the time, https://www.mpi-forum.org/docs/mpir-specification-10-11-2010.pdf, which referred to it as MPAI.

[rhc54]

For the second question: I suspect the MPIR connection is a red herring. PMIx has nothing to do with MPIR. If it is generally true that OMPI 3.x is broken with PMIx v1.2.5, then the only suggestion I can make is to simply change the configure logic to reject the older version - or for someone to fix the integration issue 😄

[jsquyres]

FWIW, DDT attaching to MPI processes seems to work fine for me at the OMPI git head, the v3.0.x HEAD, and the v4.0.x HEAD -- all using the embedded PMIx, that is. That's not quite the same as what @knjmooney is testing, but I figured I'd at least provide those data points.

[jsquyres]

This issue is stale. AFAIK, this has been fixed on the head of the v3.0.x, v3.1.x, and v4.0.x branches.