Implement merge shuffle algorithm for Numba #378
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| name: tests+artifacts+pypi | |
| defaults: | |
| run: | |
| shell: bash | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| schedule: | |
| - cron: '0 13 * * 4' | |
| release: | |
| types: [published] | |
| jobs: | |
| precommit: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.8 | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: 3.8 | |
| - name: Linting | |
| run: | | |
| pip install pre-commit | |
| pre-commit clean | |
| pre-commit autoupdate | |
| pre-commit run --all-files | |
| nojit_and_codecov: | |
| runs-on: ubuntu-latest | |
| env: | |
| NUMBA_DISABLE_JIT: 1 | |
| steps: | |
| - uses: actions/checkout@master | |
| - uses: actions/setup-python@master | |
| with: | |
| python-version: 3.9 | |
| - name: Generate coverage report | |
| run: | | |
| pip install -e . | |
| pip install -r test-time-requirements.txt | |
| pip install pytest-cov | |
| pytest --durations=10 -We tests/unit_tests --cov-report=xml --cov=PySDM | |
| - if: github.event_name == 'push' && github.ref == 'refs/heads/main' | |
| uses: codecov/codecov-action@v2 | |
| with: | |
| fail_ci_if_error: true | |
| verbose: true | |
| pdoc: | |
| strategy: | |
| matrix: | |
| platform: [ubuntu-latest, macos-latest, windows-latest] | |
| runs-on: ${{ matrix.platform }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| persist-credentials: false | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.9 | |
| - name: Build | |
| run: | | |
| pip install pdoc3 | |
| pip install -e . | |
| python -We -m pdoc --html PySDM | |
| - name: Deploy | |
| if: ${{ github.ref == 'refs/heads/main' && matrix.platform == 'ubuntu-latest' }} | |
| uses: JamesIves/[email protected] | |
| with: | |
| BRANCH: pdoc | |
| FOLDER: html/PySDM | |
| CLEAN: true | |
| pylint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.9 | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.9 | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install pylint | |
| python setup.py egg_info | |
| pip install -r *.egg-info/requires.txt | |
| pip install -r test-time-requirements.txt | |
| - name: Analysing the code with pylint | |
| run: | | |
| # TODO #682 | |
| pylint --unsafe-load-any-extension=y --disable=fixme,invalid-name,missing-function-docstring,missing-class-docstring,protected-access,duplicate-code $(git ls-files '*.py') | |
| zenodo_json: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: notiz-dev/github-action-json-property@release | |
| with: | |
| path: '.zenodo.json' | |
| prop_path: 'creators' | |
| tests: | |
| needs: [pylint, pdoc, nojit_and_codecov, precommit, zenodo_json] | |
| strategy: | |
| matrix: | |
| platform: [ubuntu-latest, macos-12, windows-latest] | |
| python-version: ["3.7", "3.10"] | |
| test-suite: ["unit_tests", "smoke_tests/box", "smoke_tests/parcel", "smoke_tests/kinematic_1d", "smoke_tests/kinematic_2d"] | |
| fail-fast: false | |
| runs-on: ${{ matrix.platform }} | |
| timeout-minutes: 45 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v1 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - run: | | |
| pip install -e . | |
| # sanity check if we do not depend on something from test-time-requirements.txt | |
| - run: | | |
| python -We -c "import PySDM" | |
| - run: | | |
| SYSTEM_VERSION_COMPAT=0 pip install -r test-time-requirements.txt | |
| # ensure previous pip did not overwrite the package | |
| - run: | | |
| pip install -e . | |
| # https://github.com/numba/numba/issues/6350#issuecomment-728174860 | |
| - if: startsWith(matrix.platform, 'ubuntu-') | |
| run: echo NUMBA_THREADING_LAYER=omp >> $GITHUB_ENV | |
| - env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: pytest --durations=10 --timeout=900 --timeout_method=thread -p no:unraisableexception -We tests/${{ matrix.test-suite }} | |
| # - if: ${{ failure() }} | |
| # uses: mxschmitt/action-tmate@v3 | |
| # with: | |
| # limit-access-to-actor: true | |
| dist: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 90 | |
| needs: [tests] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 0 # https://github.com/pypa/setuptools_scm/issues/480 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.10" | |
| - run: pip install twine build | |
| - run: | | |
| unset CI | |
| python -m build 2>&1 | tee build.log | |
| exit `fgrep -i warning build.log | grep -v impl_numba/warnings.py | wc -l` | |
| - run: twine check --strict dist/* | |
| - if: github.event_name == 'push' && github.ref == 'refs/heads/main' | |
| uses: pypa/gh-action-pypi-publish@unstable/v1 | |
| with: | |
| password: ${{ secrets.TEST_PYPI_API_TOKEN }} | |
| repository_url: https://test.pypi.org/legacy/ | |
| - if: startsWith(github.ref, 'refs/tags') | |
| uses: pypa/gh-action-pypi-publish@unstable/v1 | |
| with: | |
| password: ${{ secrets.PYPI_API_TOKEN }} |