embedding cloud_and_rain_partitioning.json in the notebook

open-atmos · Sep 24, 2024 · 1289086 · 1289086
1 parent df77130
commit 1289086
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Showing 2 changed files with 42 additions and 266 deletions.
diff --git a/examples/monarch_mod37/cloud_and_rain_partitioning.json b/examples/monarch_mod37/cloud_and_rain_partitioning.json
diff --git a/examples/particle_simulation_with_camp.ipynb b/examples/particle_simulation_with_camp.ipynb
@@ -27,7 +27,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 2,
+   "execution_count": 3,
    "id": "4f8359c2",
    "metadata": {},
    "outputs": [],
@@ -46,7 +46,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 3,
+   "execution_count": 4,
    "id": "b494ea6e",
    "metadata": {},
    "outputs": [],
@@ -61,7 +61,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 4,
+   "execution_count": 5,
    "id": "b480e7ad",
    "metadata": {},
    "outputs": [],
@@ -71,7 +71,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 5,
+   "execution_count": 6,
    "id": "a2d7bad8",
    "metadata": {},
    "outputs": [],
@@ -88,6 +88,42 @@
     ")"
    ]
   },
+  {
+   "cell_type": "code",
+   "execution_count": 7,
+   "id": "2e492520-ba61-45bb-b9b3-5a04fb6f21df",
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "cloud_and_rain_partitioning = {\n",
+    "  \"description\" : [\n",
+    "    \"Partitioning of species to aqueous. Parameters are from existing wet-deposition module.\"\n",
+    "  ],\n",
+    "  \"pmc-data\" : [\n",
+    "    {\n",
+    "      \"name\" : \"MONARCH mod37\",\n",
+    "      \"type\" : \"MECHANISM\",\n",
+    "      \"reactions\" : [\n",
+    "        {\n",
+    "          \"type\" : \"HL_PHASE_TRANSFER\",\n",
+    "          \"gas-phase species\" : \"PNA\" if item == \"HNO4\" else \"SULF\" if item == \"H2SO4\" else item,\n",
+    "          \"aerosol phase\" : \"aqueous\",\n",
+    "          \"aerosol-phase species\" : item + (\"_aero\" if item.startswith(\"ISOP\") or item.startswith(\"TERP\") else \"_aq\"),\n",
+    "          \"aerosol-phase water\" : \"H2O_aq\"\n",
+    "        } for item in (\n",
+    "            \"NO2\", \"NO\", \"O3\", \"NO3\", \"N2O5\", \"HNO3\", \"HONO\", \"H2O2\", \"NTR\", \"ROOH\", \"FORM\", \"ALD2\",\n",
+    "            \"ALDX\", \"CO\", \"MEPX\", \"MEOH\", \"FACD\", \"PAN\", \"PACD\", \"AACD\", \"PANX\", \"SO2\", \"CL2\", \"HOCL\",\n",
+    "            \"FMCL\", \"HCL\", \"NH3\", \"ETOH\", \"DMS\", \"ISOP-P1\", \"ISOP-P2\", \"TERP-P1\", \"TERP-P2\", \"HNO4\", \"H2SO4\",\n",
+    "        )\n",
+    "      ]\n",
+    "    }\n",
+    "  ]\n",
+    "}\n",
+    "\n",
+    "with open('cloud_and_rain_partitioning.json', 'w', encoding='utf-8') as f:\n",
+    "    json.dump(cloud_and_rain_partitioning, f, indent=4)"
+   ]
+  },
   {
    "cell_type": "code",
    "execution_count": 6,
@@ -568,9 +604,7 @@
    "cell_type": "code",
    "execution_count": 20,
    "id": "47474cd3",
-   "metadata": {
-    "scrolled": false
-   },
+   "metadata": {},
    "outputs": [
     {
      "data": {
@@ -5764,7 +5798,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.11.3"
+   "version": "3.9.2"
   }
  },
  "nbformat": 4,