Merge pull request #3 from onnela-lab/rev #17
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| name: Reproduction Materials | |
| on: | |
| push: | |
| branches: ["main"] | |
| pull_request: | |
| branches: ["main"] | |
| workflow_dispatch: | |
| jobs: | |
| build: | |
| name: Build | |
| runs-on: "ubuntu-latest" | |
| steps: | |
| - uses: "actions/checkout@v3" | |
| - name: Build Docker image. | |
| run: docker build -t gptools . | |
| - name: Verify notebooks are up to date. | |
| run: docker run --rm -v `pwd`:/workdir gptools pytest -v | |
| - name: Render the getting started notebook for Python. | |
| run: docker run --rm -v `pwd`:/workdir gptools cook exec getting_started:run | |
| - name: Render the getting started Rmarkdown for R. | |
| run: docker run --rm -v `pwd`:/workdir gptools cook exec getting_started_R:run | |
| - name: Generate figures (using ./in-docker.sh but we can't use `-it` in the Action). | |
| run: docker run --rm -e FAST=true -v `pwd`:/workdir gptools cook exec figures | |
| - name: Upload figures and reports as artifacts. | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: figures-reports | |
| path: | | |
| */*.html | |
| */*.png |