Merge pull request #52 from ImperialCollegeLondon/bump-dependencies

Bump all dependencies to latest version

.github/dependabot.yml

@@ -0,0 +1,15 @@
+# To get started with Dependabot version updates, you'll need to specify which
+# package ecosystems to update and where the package manifests are located.
+# Please see the documentation for all configuration options:
+# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates
+
+version: 2
+updates:
+  - package-ecosystem: pip
+    directory: /
+    schedule:
+      interval: weekly
+  - package-ecosystem: github-actions
+    directory: /
+    schedule:
+      interval: weekly

.github/workflows/ci.yml

@@ -16,7 +16,7 @@ jobs:
         os:
           - ubuntu-latest
           - windows-latest
-        python-version: ['3.11']
+        python-version: ['3.10', '3.11', '3.12']
     steps:
       - uses: actions/checkout@v4
       - name: Install poetry

README.md

@@ -4,7 +4,7 @@
 [![DOI:10.3389/fdgth.2022.788124](http://img.shields.io/badge/DOI-10.3389/fdgth.2022.788124-70286A.svg)](https://doi.org/10.3389/fdgth.2022.788124)
 [![License: GPL v3](https://img.shields.io/badge/License-GPLv3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0)
 
-*Requires python 3.8+*
+*Requires Python 3.10+*
 
 The Automated pipeline for Consistent Outputs from Research Publications (Auto-CORPus) is a tool for the standardisation and conversion of publication HTML to three convenient machine-interpretable outputs to support biomedical text analytics. Firstly, Auto-CORPus can be configured to convert HTML from various publication sources to [BioC format](http://bioc.sourceforge.net/). Secondly, Auto-CORPus transforms publication tables to a JSON format to store, exchange and annotate table data between text analytics systems. Finally, Auto-CORPus extracts abbreviations declared within publication text and provides an abbreviations JSON output that relates an abbreviation with the full definition.