Bump OMEZarrReader to 0.5.2

[dgault]

Bumping version of ZarrReader to 0.5.2

The bioformats2raw dependency included in the build.gradle is only included as a test dependency so I don't believe this requires a version bump. Looking at the code I also don't think that dependency is actually being used for an actual test at the minute and could likely be removed completely along with the 1 test method using it.

@khaledk2, I don't believe there is any other dependencies for Bio-Fromats or Omero included here that require a version bump, is that correct?

[khaledk2]

@dgault I think loci.formats.FormatTools is a Bio-Format package and it is used in many classes, e.g.

omero-ms-image-region/src/main/java/com/glencoesoftware/omero/ms/image/region/HistogramRequestHandler.java

Line 35 in e41eaaa

import loci.formats.FormatTools;

Am I correct?

[dgault]

Yeah, I am assuming that is being brought in via OMERO blitz, so that would need bumped also

[melissalinkert]

Likely outside the scope of this PR, but FYI https://github.com/glencoesoftware/bioformats2raw/releases/tag/v0.9.4 was just released and includes Bio-Formats 7.3.1.

The following suggest that bioformats2raw is actively used in the tests:

• omero-ms-image-region/src/test/java/com/glencoesoftware/omero/ms/image/region/ImageDataRequestHandlerTest.java

  Line 490 in e41eaaa

  createPixelBuffer();

• omero-ms-image-region/src/test/java/com/glencoesoftware/omero/ms/image/region/ImageDataRequestHandlerTest.java

  Line 1020 in e41eaaa

  createPixelBuffer(); // Resets pixel buffer with int8 pixels type

• omero-ms-image-region/src/test/java/com/glencoesoftware/omero/ms/image/region/ImageDataRequestHandlerTest.java

  Line 405 in e41eaaa

  Path output = writeTestZarr(

• omero-ms-image-region/src/test/java/com/glencoesoftware/omero/ms/image/region/ImageDataRequestHandlerTest.java

  Line 676 in e41eaaa

  assertBioFormats2Raw(input, output);

• omero-ms-image-region/src/test/java/com/glencoesoftware/omero/ms/image/region/ImageDataRequestHandlerTest.java

  Line 567 in e41eaaa

  Converter converter = new Converter();

[dgault]

In that case bumping to the latest bioformats2raw would make most sense and keep everything aligned