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ModuleNotFoundError: No module named 'omero_zarr._version' #154
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Seems this may only be an issue when installing this from github:
Installing directly from pypi fixes this issue. |
Having released Comparing the releases, I don't see any code changes that would cause this issue: |
Returning to a conda env on |
cc @jburel @joshmoore - Any ideas what's going on here? Seems the 0.5.4 release is broken, so we need to fix or revert the release (if that's possible)? |
I'm inclined to move to verioneer as in German-BioImaging/omero-rdf#4 |
Move to the use of https://github.com/python-versioneer/python-versioneer for defining a version from the current tag. This also removes the need to use bump2version, therefore releases can be handled completely from the GH UI.
Move to the use of https://github.com/python-versioneer/python-versioneer for defining a version from the current tag. This also removes the need to use bump2version, therefore releases can be handled completely from the GH UI.
the problem is coming from scm itself.
|
Heh. Nice find. If you'd prefer the more immediate fix, no objection. I do have the feeling that we should be migrating |
I have been thinking about that migration too. This is a new repo so it will make sense to start with that one |
@jburel Where are you seeing that error? All the recent PRs have been 'green' when merged? |
Ah - you're talking about Josh's PR, not the |
Repository: ome/omero-cli-zarr Excluded PRs: - PR 153 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#343 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/343/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 153 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#344 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/344/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 153 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#345 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/345/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#346 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/346/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#347 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/347/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#348 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/348/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#349 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/349/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#350 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/350/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#353 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/353/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#354 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/354/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#355 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/355/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#356 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/356/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#357 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/357/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#358 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/358/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' - PR 157 will-moore 'Pixel type fix' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#359 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/359/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Updating ed229f0..80b8a0e Previously merged: - PR 157 will-moore 'Pixel type fix' Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#360 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/360/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#361 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/361/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#362 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/362/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#363 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/363/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#364 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/364/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#365 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/365/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' - PR 159 will-moore 'scm version fix' Generated by OMERO-plugins-push#366 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/366/)
Repository: ome/omero-cli-zarr Excluded PRs: - PR 158 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up-to-date. Merged PRs: - PR 147 will-moore 'Name option' - PR 156 joshmoore 'Use versioneer for tagging (Fix ome#154)' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' - PR 159 will-moore 'scm version fix' Generated by OMERO-plugins-push#367 (https://snoopycrimecop-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/367/)
I'm seeing an import Error using a conda environment on
ome-zarr-dev1
machine (but I don't see any error on a local env): e.g.I tried a different pattern to import
__version__
within__init__.py
:Again, this works on my local machine but not on the
ome-zarr-dev1
server env:The text was updated successfully, but these errors were encountered: