table updates upon sed coastal integration

docs/source/csv_tables/osl-tl_agemodelID_FIELDS.csv

@@ -1,16 +1,17 @@
-AGEMODELID,AGEMODEL,AGEMODELAB
--9999,no data,ND
-1,Average Dose Model,ADM
-2,Arithmetic Mean,AVG
-3,Average variance,AVVAR
-4,Central Age Model,CAM
-5,Unlogged Central Age Mode,CAM_UL
-6,Common Age Model,COM_AM
-7,Finite Mixture Model,FMM
-8,Internal–External Consistency Criterion,IEU
-9,Minimum Age Model,MAM
-10,Unlogged Minimum Age Model,MAM_UL
-11,Maximum Age Model,MAX
-12,normalised Median Absolute Deviation Central Age Model,nMAD_CAM
-13,pdf Gaussian Age Model,PDFG
-14,Probability Density Summation Method,PDS
+"AGEMODELID","AGEMODEL","AGEMODELAB"
+-9999,"no data","ND"
+1,"Average Dose Model","ADM"
+2,"Arithmetic Mean","AVG"
+3,"Average variance","AVVAR"
+4,"Central Age Model","CAM"
+5,"Unlogged Central Age Mode","CAM_UL"
+6,"Common Age Model","COM_AM"
+7,"Finite Mixture Model","FMM"
+8,"Internal–External Consistency Criterion","IEU"
+9,"Minimum Age Model","MAM"
+10,"Unlogged Minimum Age Model","MAM_UL"
+11,"Maximum Age Model","MAX"
+12,"normalised Median Absolute Deviation Central Age Model","nMAD_CAM"
+13,"pdf Gaussian Age Model","PDFG"
+14,"Probability Density Summation Method","PDS"
+15,"Central / Minimum Age Model","CAM/MAM"

docs/source/csv_tables/sed_faciesID.csv

@@ -1,3 +1,4 @@
 Field,Data type,Key,Not Null,Parent
 FACIESID,int2 seq.,pkey,TRUE,
-FACIES,text,ukey,TRUE,
+FACIES,text,ukey,TRUE,
+PARENTID,int2,fkey,,FACIESID,

docs/source/csv_tables/sed_faciesID_FIELDS.csv

@@ -1,11 +1,31 @@
-FACIESID,FACIES
--9999,ND
-1,Channel
-2,Overbank
-3,Beach / Shoreline
-4,Deep-water lacustrine
-5,Shallow-water lacustrine
-6,Near-shore lacustrine
-7,Lacustrine (water depth unclear)
-8,Playa
-9,Calcareous deposits
+"FACIESID","FACIES","PARENTID"
+-9999,"ND",-9999
+1,"Channel",11
+2,"Overbank",11
+3,"Beach / Shoreline",14
+4,"Deep-water lacustrine",7
+5,"Shallow-water lacustrine",7
+6,"Near-shore lacustrine",7
+7,"Lacustrine (water depth unclear)",7
+8,"Playa",7
+9,"Calcareous deposits",9
+10,"Terrestrial",10
+11,"Fluvial",10
+12,"Marine",12
+13,"Aeolian",10
+14,"Littoral",14
+15,"Dune",13
+16,"Washover",14
+17,"Cyclone or storm deposit",14
+18,"Estuarine",18
+19,"Back-barrier / estuarine ",18
+20,"Lagoonal / lacustrine",7
+21,"Tidal flat ",14
+22,"Nearshore (to wave base)",14
+23,"Shelf",12
+24,"Inner shelf",23
+25,"Outer shelf",23
+26,"Sea Floor Sediments",12
+27,"Estuarine clay / mud",18
+28,"Channel sands and gravels",11
+29,"Estuarine sand",18

docs/source/csv_tables/sed_geotypeID.csv

@@ -1,3 +1,4 @@
 Field,Data type,Key,Not Null,Parent
 GEOTYPEID,int2 seq.,pkey,TRUE,
-GEOTYPE,text,ukey,TRUE,
+GEOTYPE,text,ukey,TRUE,
+PARENTID,int2,fkey,,GEOTYPEID

docs/source/csv_tables/sed_geotypeID_FIELDS.csv

@@ -1,17 +1,33 @@
-GEOTYPEID,GEOTYPE
--9999,ND
-1,Terrace
-2,Floodplain
-3,Alluvial fan
-4,Bench
-5,Island
-6,Slack water deposit
-7,Levee
-8,Dune
-9,Sandsheet
-10,Beach / Shoreline
-11,Nearshore deposit
-12,Lake floor
-13,Lakeshore terrace
-14,Deflated cliff
-15,Bar
+"GEOTYPEID","GEOTYPE","PARENTID"
+-9999,"ND",NA
+1,"Terrace",NA
+2,"Floodplain",NA
+3,"Alluvial fan",31
+4,"Bench",NA
+5,"Island",NA
+6,"Slack water deposit",NA
+7,"Levee",NA
+8,"Dune",NA
+9,"Sandsheet",NA
+10,"Beach / Shoreline",NA
+11,"Nearshore deposit",NA
+12,"Lake floor",NA
+13,"Lakeshore terrace",1
+14,"Deflated cliff",NA
+15,"Bar",NA
+16,"Washover fan",31
+17,"Aeolianite",NA
+18,"Tsunami deposit",NA
+19,"Marine terrace",1
+20,"Clifftop dune",8
+21,"Coastal barrier (not specific)",NA
+22,"Coastal barrier (ridge plain)",NA
+23,"Coastal barrier (transgressive dune)",8
+24,"Cheniers",NA
+25,"Flood-tide delta",NA
+26,"Terrestrial dune",8
+27,"Estuarine floodplain",2
+28,"Delta front",NA
+29,"Shoreface",NA
+30,"Deep sea bed",NA
+31,"Fan",NA

docs/source/data_tables.rst

@@ -7,7 +7,7 @@ PostgreSQL data types, constraints, and foreign key principles are comprehensibl
 
 .. note::
 
-    To ensure database integrity, any OCTOPUS db relation features a "CREATED_AT" (= *record timestamp* with timezone based on UTC) and a "UPDATED_AT" (= *timestamp of record update* with timezone based on UTC) field, respectively. These fields are automatically populated upon db trigger, however, are not displayed as part of this documentation for the sake of readability.
+    To ensure database integrity, every OCTOPUS db relation features a "CREATED_AT" (= *record timestamp* with timezone based on UTC) and a "UPDATED_AT" (= *timestamp of record update* with timezone based on UTC) field, respectively. These fields are automatically populated upon db trigger, however, are not displayed as part of this documentation for the sake of readability.
 
 ..  _Global_tables:
 

docs/source/parent_tables.rst

@@ -140,7 +140,7 @@ global_RefAbstract fields
    :file: ./csv_tables/global_RefAbstract_FIELDS_trunc.csv
    :header-rows: 1
 
-| The latest *global_RefAbstract* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_global_RefAbstract__202404291521.csv>`_ |:chipmunk:|
+| The latest *global_RefAbstract* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_global_RefAbstract__202410081241.csv>`_ |:chipmunk:|
 | (|:back:| to :ref:`global_RefAbstract` variable specs)
 
 ..  _global_Author_Fields:
@@ -152,7 +152,7 @@ global_Author fields
    :file: ./csv_tables/global_Author_FIELDS_trunc.csv
    :header-rows: 1
 
-| The latest *global_Author* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_global_Author__202404291520.csv>`_ |:chipmunk:|
+| The latest *global_Author* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_global_Author__202410081240.csv>`_ |:chipmunk:|
 | (|:back:| to :ref:`global_Author` variable specs)
 
 ..  _global_DataSetMaster_Fields:
@@ -176,7 +176,7 @@ global_Journal fields
    :file: ./csv_tables/global_Journal_FIELDS_trunc.csv
    :header-rows: 1
 
-| The latest *global_Journal* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_global_Journal__202404291521.csv>`_ |:chipmunk:|
+| The latest *global_Journal* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_global_Journal__202410081240.csv>`_ |:chipmunk:|
 | (|:back:| to :ref:`global_Journal` variable specs)
 
 ..  _global_PubType_Fields:
@@ -265,7 +265,7 @@ cabah_LabCodes fields
    :file: ./csv_tables/cabah_LabCodes_FIELDS_trunc.csv
    :header-rows: 1
 
-| The latest *cabah_LabCodes* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_cabah_LabCodes__202311161258.csv>`_ |:chipmunk:|
+| The latest *cabah_LabCodes* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_cabah_LabCodes__202410081242.csv>`_ |:chipmunk:|
 | (|:back:| to :ref:`cabah_LabCodes` variable specs)
 
 ..  _cabah_agetypeID_Fields:
@@ -1112,7 +1112,7 @@ osl-tl_agemodelID fields
    :file: ./csv_tables/osl-tl_agemodelID_FIELDS.csv
    :header-rows: 1
 
-| The latest *osl-tl_agemodelID* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_osl_tl_agemodelID__202305230906.csv>`_ |:chipmunk:|
+| The latest *osl-tl_agemodelID* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_osl_tl_agemodelID__202410081241.csv>`_ |:chipmunk:|
 | (|:back:| to :ref:`osl-tl_agemodelID` variable specs)
 
 ..  _osl-tl_ed_procID_Fields:
@@ -1198,7 +1198,7 @@ sed_faciesID fields
    :file: ./csv_tables/sed_faciesID_FIELDS.csv
    :header-rows: 1
 
-| The latest *sed_faciesID* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_sed_faciesID__202305230906.csv>`_ |:chipmunk:|
+| The latest *sed_faciesID* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_sed_faciesID__202410081241.csv>`_ |:chipmunk:|
 | (|:back:| to :ref:`sed_faciesID` variable specs)
 
 ..  _sed_geommodID_Fields:
@@ -1222,7 +1222,7 @@ sed_geotypeID fields
    :file: ./csv_tables/sed_geotypeID_FIELDS.csv
    :header-rows: 1
 
-| The latest *sed_geotypeID* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_sed_geotypeID__202305230906.csv>`_ |:chipmunk:|
+| The latest *sed_geotypeID* table version can be downloaded `here <https://github.com/octopus-db/documentation/tree/main/docs/source/storage/_sed_geotypeID__202410081242.csv>`_ |:chipmunk:|
 | (|:back:| to :ref:`sed_geotypeID` variable specs)
 
 ..  _sed_laketypeID_Fields: