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Lancet release v1.0.7

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@gnarzisi gnarzisi released this 16 Jul 21:47
· 6 commits to master since this release

Minor release that:

  1. supports a new command line parameter to request only primary alignments to be used for variant calling;
  2. supports complex events: multiple consecutive snv, ins, del at a locus reported in the output VCF a a single replacement operation event;
  3. includes a new parameter to control AS and XS difference when selecting read alignments;
  4. implements better type support when extracting tags from sam alignments;
  5. automatically turns off the active region module if MD tags are missing from the BAM file;
  6. includes updated APIs: htslib v1.8 and bamtools v2.5.1;