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Quantile Implementation #664

Merged
merged 138 commits into from
Aug 14, 2023
Merged

Quantile Implementation #664

merged 138 commits into from
Aug 14, 2023

Commits on Oct 4, 2022

  1. Quantile Python implementation and test.

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Commits on Oct 6, 2022

  1. Merge branch 'nv-legate:branch-22.12' into fea_ext_py_quantiles

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  2. Added boilerplate integration code for quantile.

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Commits on Oct 10, 2022

  1. fixed ceil() call

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  2. Added 1st quantile pytest.

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Commits on Oct 11, 2022

  1. Fixed 1st quantile pytest: added missing main.

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Commits on Oct 13, 2022

  1. Fixed global dtype to numpy.dtype.

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  2. Replaced product() with numpy.product().

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Commits on Oct 17, 2022

  1. Debugging 'nearest'. Failed attempts, but some useful ways to simplif… 

    …y the repro.
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Commits on Oct 18, 2022

  1. Simplified 'nearest' implementation.

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  2. Fix for 'nearest' implementation.

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  3. Added more quantile tests.

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Commits on Oct 19, 2022

  1. Clean-up.

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Commits on Oct 20, 2022

  1. Merge branch 'nv-legate:branch-22.12' into fea_ext_py_quantiles

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Commits on Oct 24, 2022

  1. FIxed module.py formatting issues.

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  2. FIxed test_quantiles.py formatting issues.

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Commits on Oct 26, 2022

  1. Merge branch 'branch-22.12' into fea_ext_py_quantiles

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Commits on Oct 27, 2022

  1. Merge branch 'branch-22.12' into fea_ext_py_quantiles

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  2. Merge branch 'branch-22.12' into fea_ext_py_quantiles

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Commits on Nov 1, 2022

  1. Merge branch 'branch-22.12' into fea_ext_py_quantiles

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  2. Adrressed comments on re-using 'out' if given.

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Commits on Nov 2, 2022

  1. Merge branch 'branch-22.12' into fea_ext_py_quantiles

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  2. Fixed 'out' management for scalar input.

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Commits on Nov 4, 2022

  1. Fix for keepdims with multiple axes.

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  3. Added tests to check for the supplied output case.

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Commits on Nov 7, 2022

  1. Added the keepdims = True case for out is not None. Caveat: there's a… 

    … numpy bug associated with it: numpy/numpy#22544
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Commits on Nov 8, 2022

  1. Addressed comment on scalar input asarray().

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  3. Addressed comment on scalar input np.asarray().

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  4. Addressed comment on add_boilerplate.

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Commits on Nov 9, 2022

  1. Fixed LEGATE_MAX_DIM issues in tests.

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Commits on Nov 10, 2022

  1. Attempts to fix ndenumerate() approach.

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  2. Attempts to fix ndenumerate() approach. More debugging.

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Commits on Nov 14, 2022

  1. Fixed ndenumerate, non-flattening approach.

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  2. Clean-up (flake8).

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Commits on Nov 16, 2022

  1. Addressed comment on directly using qs_all for result.

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  2. Addressed comment on input_is_scalar.

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  3. Addressed comment on replacing take([pos],...) by just take(pos,...).

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  4. Addressed comment on always using asarray(q).

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  5. Addressed comment on removing is_sorted() check.

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  6. Addressed comment on more pythonic list comprehension in any().

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  7. Addressed comment on using math.floor().

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Commits on Nov 17, 2022

  1. Addressed comment on using sorted() instead of sort().

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  2. Addressed comment on removing last 2 args, to be deprecated.

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  3. Removed docstring on deprecated 'interpolation' arg.

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  4. Addressed comment on qs_all[...].

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Commits on Nov 18, 2022

  1. Addressed comment on in-place update of qs_all (avoids copies).

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  3. Addressed comment on overwrite_input test. Added.

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Commits on Nov 21, 2022

  1. Addressed comment on using allclose().

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  3. Fixed keepdims=True failures.

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Commits on Nov 22, 2022

  1. Addressed comment on adding multiple consecutive axes test, (0, 1).

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Commits on Nov 29, 2022

  1. Added test to debug axis=None case.

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  3. Partial fix for axis=None failures.

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Commits on Nov 30, 2022

  1. Fix for axis=None failures.

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  3. Addressed review on not doing all(shapes).

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  4. Addressed review on not returning empty tuple from in_place_interp().

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Commits on Dec 1, 2022

  1. Added tests for random input.

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Commits on Dec 2, 2022

  1. Addressed review on throwing on complex input.

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  2. Addressed review on float128.

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  3. Addressed reviews on better replacement for in_place_interp() and usi… 

    …ng TypeError.
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  5. Addressed reviews on axes_set confusing apparent dependency on arr.sh… 

    …ape and remaining_shape as tuple of 1s.
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  6. Completely removed the artificial dependency of axes_set to arr.shape.

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Commits on Dec 5, 2022

  1. Addressed comments on replacing np with num; fixed Weibull issue.

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  3. Addressed comments on mypy function signatures: floor_i().

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  4. Addressed comments on mypy function signatures: method functions.

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  5. Addressed comments on mypy function signatures: is_diff().

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  6. Addressed comments on mypy function signatures: reshuffle_reshape().

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Commits on Dec 6, 2022

  1. Addressed comments on mypy function signatures: quantile_impl().

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  3. Addressed comments on mypy function signatures: quantile(). Tentative 1.

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  4. Addressed comments on mypy function signatures: quantile(). Tentative… 

    … 2 (temporary fix, until better axis type can be provided).
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  5. Addressed comments on mypy function signatures: quantile(). Tentative… 

    … 3: adjust quantile_impl() signature.
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  6. Addressed comments on mypy function signatures: quantile().

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Commits on Dec 7, 2022

  1. Addressed reviews on corner cases: quantile limits {0.0, 1.0}.

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Commits on Dec 8, 2022

  1. Possible solution for the case of a <- scalar, list, or tuple. Attemp… 

    …t 1.
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  2. Better solution for the case of a <- scalar, list, or tuple.

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Commits on Dec 9, 2022

  1. Addressed review on testing output cast, but functionality awaits bug… 

    …-fixes in numpy.
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  3. Addressed review on annotating a: ndarray and removing the asarray() … 

    …coercion.
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Commits on Dec 10, 2022

  1. Re-activated skipped test to, at least, run the output cast, w/o chec… 

    …king, for now, due to numpy issue 22766.
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Commits on Dec 12, 2022

  1. Re-activated skipped output downcast test from float64 to float32 (ra… 

    …ther than int, which fails in numpy, due to numpy issue 22766).
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Commits on Dec 15, 2022

  1. Merge branch 'branch-22.12' into fea_ext_py_quantiles

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Commits on Dec 29, 2022

  1. Merge branch 'branch-22.12' into fea_ext_py_quantiles

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Commits on Dec 30, 2022

  1. Cosmetic changes

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  2. Use np instead of num

    @manopapad
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  3. Use num instead of cu

    @manopapad
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  4. Make sure all test input arrays are vanilla NumPy arrays 

    Because cuNumeric supports the __array_function__ protocol, if you pass a
cuNumeric array to a vanilla NumPy method, it will dispatch through to the
cuNumeric implementation, meaning that np.foo(arr) and cn.foo(arr) end up
doing the same thing, and we're not testing anything by comparing them.
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  5. Fix typing of axis

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  6. Minor cleanups

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  7. Clean up some comments

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  8. No need for helper method for tuple comparison

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  9. Clean up docs

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  10. Typo in docs

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Commits on Jan 19, 2023

  1. Merge branch 'nv-legate:branch-22.12' into fea_ext_py_quantiles

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Commits on Jan 21, 2023

  1. Fix for upper-bound quantile on averaged_interpolated_cdf.

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Commits on Feb 1, 2023

  1. Merge branch 'nv-legate:branch-23.03' into fea_ext_py_quantiles

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Commits on Mar 1, 2023

  1. Merge branch 'nv-legate:branch-23.03' into fea_ext_py_quantiles

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Commits on Mar 8, 2023

  1. Merge branch 'nv-legate:branch-23.05' into fea_ext_py_quantiles

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Commits on Mar 9, 2023

  1. Added seeding to quantile tests.

    Andrei Schaffer committed Mar 9, 2023
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Commits on Mar 14, 2023

  1. Added percentile() main function.

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  2. Percentile. Fix. Test failing.

    @aschaffer
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  4. Fixed args fwd-ing.

    @aschaffer
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Commits on Mar 22, 2023

  1. Added profiling test for quantiles.

    Andrei Schaffer committed Mar 22, 2023
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Commits on Mar 23, 2023

  1. Merge branch 'nv-legate:branch-23.05' into fea_ext_py_quantiles

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Commits on Mar 30, 2023

  1. Increased dimension of input array.

    Andrei Schaffer committed Mar 30, 2023
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Commits on Apr 4, 2023

  1. Fixed cupy failure with q.ndim > 1.

    Andrei Schaffer committed Apr 4, 2023
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Commits on Apr 6, 2023

  1. Refactored for performance.

    @aschaffer
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Commits on Apr 18, 2023

  1. Merge branch 'nv-legate:branch-23.05' into fea_ext_py_quantiles

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Commits on Jul 28, 2023

  1. Merged branch-23.09.

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Commits on Aug 2, 2023

  1. Merge branch 'nv-legate:branch-23.09' into fea_ext_py_quantiles

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Commits on Aug 3, 2023

  1. Merge branch 'nv-legate:branch-23.09' into fea_ext_py_quantiles

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Commits on Aug 11, 2023

  1. Replaced deprecated np.product().

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Commits on Aug 12, 2023

  1. Fixed typo in str_method.

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Commits on Aug 14, 2023

  1. Merge branch 'branch-23.09' into fea_ext_py_quantiles

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  2. Fix pre-commit complaints

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