fix: flake8 issues

ntua-unit-of-control-and-informatics · Aug 1, 2024 · 2fe7ba3 · 2fe7ba3
1 parent 096dbbb
commit 2fe7ba3
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Showing 16 changed files with 10 additions and 191 deletions.
diff --git a/.github/workflows/python-app.yml b/.github/workflows/python-app.yml
@@ -33,7 +33,7 @@ jobs:
         # stop the build if there are Python syntax errors or undefined names
         flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
         # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
-        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+        flake8 . --count --max-complexity=10 --max-line-length=127 --statistics
 #    - name: Test with pytest
 #      run: |
 #        pytest
diff --git a/src/entities/algorithm.py b/src/entities/algorithm.py
diff --git a/src/entities/dataentry.py b/src/entities/dataentry.py
diff --git a/src/entities/dataset.py b/src/entities/dataset.py
diff --git a/src/entities/entryid.py b/src/entities/entryid.py
diff --git a/src/entities/error_report.py b/src/entities/error_report.py
diff --git a/src/entities/feature.py b/src/entities/feature.py
diff --git a/src/entities/featureinfo.py b/src/entities/featureinfo.py
diff --git a/src/entities/jaqpot_base.py b/src/entities/jaqpot_base.py
diff --git a/src/entities/meta.py b/src/entities/meta.py
diff --git a/src/entities/model.py b/src/entities/model.py
diff --git a/src/entities/parameter.py b/src/entities/parameter.py
diff --git a/src/entities/task.py b/src/entities/task.py
diff --git a/src/handlers/predict.py b/src/handlers/predict.py
@@ -1,6 +1,7 @@
 from ..entities.prediction_request import PredictionRequestPydantic
 from ..helpers import model_decoder, json_to_predreq
 
+
 def model_post_handler(request: PredictionRequestPydantic):
     model = model_decoder.decode(request.model['rawModel'])
     data_entry_all = json_to_predreq.decode(request, model)
@@ -24,4 +25,4 @@ def model_post_handler(request: PredictionRequestPydantic):
 
     final_all = {"predictions": [dict(zip(results, t)) for t in zip(*results.values())]}
 
-    return final_all
+    return final_all
diff --git a/src/helpers/json_to_predreq.py b/src/helpers/json_to_predreq.py
@@ -1,11 +1,12 @@
 from jaqpotpy.datasets import JaqpotpyDataset
 import pandas as pd
 
+
 def decode(request, model):
     df = pd.DataFrame(request.dataset['input'])
-    independentFeatures = request.model['independentFeatures']
-    smiles_cols = [feature['key'] for feature in independentFeatures if feature['featureType'] == 'SMILES']
-    x_cols = [feature['key'] for feature in independentFeatures if feature['featureType'] != 'SMILES']
+    independent_features = request.model['independentFeatures']
+    smiles_cols = [feature['key'] for feature in independent_features if feature['featureType'] == 'SMILES']
+    x_cols = [feature['key'] for feature in independent_features if feature['featureType'] != 'SMILES']
     dataset = JaqpotpyDataset(df=df, smiles_cols=smiles_cols,  x_cols=x_cols,
                               task=model.task, featurizer=model.featurizer)
     return dataset
diff --git a/src/helpers/model_decoder.py b/src/helpers/model_decoder.py
@@ -2,8 +2,9 @@
 import pickle
 import compress_pickle
 
-def decode(rawModel):
-    model = b64decode(rawModel)
+
+def decode(raw_model):
+    model = b64decode(raw_model)
     try:
         p_mod = compress_pickle.loads(model, compression='bz2')
     except Exception as e: