GitHub - noporpoise/bioinf-perl: Perl libraries and scripts for everyday bioinformatics tasks, including VCF, FASTA & FASTQ handling

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Perl libraries and scripts for everyday bioinformatics tasks, including VCF, FASTA & FASTQ handling

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Name		Name	Last commit message	Last commit date
Latest commit History 332 Commits
blast_scripts		blast_scripts
cortex_scripts		cortex_scripts
de_bruijn		de_bruijn
fastn_scripts		fastn_scripts
genetics		genetics
lib		lib
sam_scripts		sam_scripts
sim_mutations		sim_mutations
utilities		utilities
vcf_scripts		vcf_scripts
README		README

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Bioinformatics perl scripts
1 Nov 2013
Isaac Turner
[email protected]

== Install ==

0) git clone git://github.com/noporpoise/bioinf-perl.git

1) Add the lib directory to perl's @INC path by adding the following lines to
   your ~/.profile

PERL5LIB=${PERL5LIB}:${HOME}/bioinf-perl/lib/
export PERL5LIB

2) That's it!  Now run some scripts.  


== Development ==

The code is updated regularly.  Run 'git pull' from the bioinf-perl directory to
update.  Get in touch if you have feature requests ([email protected]).