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use exist_ok instead of explicit check for path exists when creating hash cache so it is multiprocess safe #1214

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use exist_ok instead of explicit check for path exists when creating hash cache so it is multiprocess safe

use exist_ok instead of explicit check for path exists when creating hash cache so it is multiprocess safe #1214

Workflow file for this run

.github/workflows/testsingularity.yml at f022435
name: Singularity
on:
push:
branches:
- master
pull_request:
jobs:
build:
name: Build
runs-on: ubuntu-latest
strategy:
matrix:
python-version: [3.8, 3.9, "3.10", "3.11"]
fail-fast: False
steps:
- name: Set env
run: |
echo "RELEASE_VERSION=v3.7.1" >> $GITHUB_ENV
echo "NO_ET=TRUE" >> $GITHUB_ENV
- name: Setup Singularity
uses: actions/checkout@v4
with:
repository: hpcng/singularity
ref: 'v3.7.1'
path: 'singularity'
- name: Setup GO
uses: actions/setup-go@v5
with:
go-version: '^1.13'
- name: Install OS deps
run: |
sudo apt-get update
sudo apt-get install flawfinder squashfs-tools uuid-dev libuuid1 libffi-dev libssl-dev libssl1.1 \
libarchive-dev libgpgme11-dev libseccomp-dev wget gcc make pkg-config -y
- name: Build
run: |
cd singularity
./mconfig --without-suid -p /usr/local/
make -C ./builddir
sudo make -C ./builddir install
cd ..
- name: Echo singularity version
run: |
echo ${{ github.ref }}
singularity --version
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Update build tools
run: python -m pip install --upgrade pip
- name: Checkout Pydra repo
uses: actions/checkout@v4
with:
repository: ${{ github.repository }}
- name: Install pydra (test)
run: pip install -e ".[test]"
- name: Pytest
run: pytest -vs --cov pydra --cov-config .coveragerc --cov-report xml:cov.xml pydra/engine/tests/test_singularity.py
- name: Upload to codecov
run: codecov -f cov.xml -F unittests -e GITHUB_WORKFLOW