DOC: Improve plot_corrmat
function docstring
#74
Workflow file for this run
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# This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
name: Python package | |
on: | |
push: | |
branches: [ '*' ] | |
tags: [ '*' ] | |
pull_request: | |
branches: [ main, 'maint/*' ] | |
jobs: | |
build: | |
if: "!startsWith(github.ref, 'refs/tags/') && !contains(github.event.head_commit.message, '[skip ci]')" | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
steps: | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- uses: actions/checkout@v4 | |
with: | |
ssh-key: "${{ secrets.NIPREPS_DEPLOY }}" | |
fetch-depth: 0 | |
- name: Build in confined environment and interpolate version | |
run: | | |
python -m venv /tmp/buildenv | |
source /tmp/buildenv/bin/activate | |
python -m pip install -U build hatch pip twine | |
python -m build -s -w | |
python -m twine check dist/mriqc_learn-* | |
mv dist /tmp/package | |
# Interpolate version | |
if [[ "$GITHUB_REF" == refs/tags/* ]]; then | |
TAG=${GITHUB_REF##*/} | |
fi | |
THISVERSION=$( python -m hatch version | tail -n1 | xargs ) | |
THISVERSION=${TAG:-$THISVERSION} | |
echo "Expected VERSION: \"${THISVERSION}\"" | |
echo "THISVERSION=${THISVERSION}" >> ${GITHUB_ENV} | |
- name: Install in confined environment [pip] | |
run: | | |
python -m venv /tmp/pip | |
source /tmp/pip/bin/activate | |
pip install -U pip | |
python -m pip install . | |
INSTALLED_VERSION=$(python -c 'import mriqc_learn as em; print(em.__version__, end="")') | |
echo "VERSION: \"${THISVERSION}\"" | |
echo "INSTALLED: \"${INSTALLED_VERSION}\"" | |
test "${INSTALLED_VERSION}" = "${THISVERSION}" | |
- name: Install in confined environment [sdist] | |
run: | | |
python -m venv /tmp/install_sdist | |
source /tmp/install_sdist/bin/activate | |
pip install -U pip | |
python -m pip install /tmp/package/mriqc_learn*.tar.gz | |
INSTALLED_VERSION=$(python -c 'import mriqc_learn as em; print(em.__version__, end="")') | |
echo "VERSION: \"${THISVERSION}\"" | |
echo "INSTALLED: \"${INSTALLED_VERSION}\"" | |
test "${INSTALLED_VERSION}" = "${THISVERSION}" | |
- name: Install in confined environment [wheel] | |
run: | | |
python -m venv /tmp/install_wheel | |
source /tmp/install_wheel/bin/activate | |
pip install -U pip | |
python -m pip install /tmp/package/mriqc_learn*.whl | |
INSTALLED_VERSION=$(python -c 'import mriqc_learn as em; print(em.__version__, end="")') | |
echo "INSTALLED: \"${INSTALLED_VERSION}\"" | |
test "${INSTALLED_VERSION}" = "${THISVERSION}" |