Merge pull request #12 from kashefy/large_arr #36
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| name: nosetests | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| max-parallel: 5 | |
| matrix: | |
| python-version: [ 3.7, 3.8, 3.9 ] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Add conda to system path | |
| run: | | |
| # $CONDA is an environment variable pointing to the root of the miniconda directory | |
| echo $CONDA/bin >> $GITHUB_PATH | |
| conda init bash | |
| - name: Install dependencies | |
| run: | | |
| conda create -q -n test-env python=${{ matrix.python-version }} pytables numpy scipy pandas tqdm | |
| source activate test-env | |
| # - name: Lint with flake8 | |
| # run: | | |
| # conda install flake8 | |
| # # stop the build if there are Python syntax errors or undefined names | |
| # flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| # flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Set my pythonpath | |
| run: | | |
| echo "PYTHONPATH=/home/runner/work/rsatools/rsatools" >> $GITHUB_ENV | |
| - name: show python path | |
| run: | | |
| python -c "import sys; print('\n'.join(sys.path))" | |
| - name: Unit Testing | |
| run: | | |
| source activate test-env | |
| python --version | |
| conda install -q nose coveralls | |
| nosetests --with-coverage | |
| - name: Coveralls | |
| uses: AndreMiras/coveralls-python-action@develop | |
| with: | |
| parallel: true | |
| flag-name: Unit Testing | |
| finish: | |
| needs: build | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Coveralls Finished | |
| uses: AndreMiras/coveralls-python-action@develop | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| parallel-finished: true |