Merge pull request #2 from nickjcroucher/numpy_base_patterns

Numpy base patterns
nickjcroucher · Dec 6, 2020 · 0944486 · 0944486
2 parents 78225ac + 7aefbb1
commit 0944486
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diff --git a/python/gubbins/ValidateFastaAlignment.py b/python/gubbins/ValidateFastaAlignment.py
@@ -41,9 +41,6 @@ def does_each_sequence_have_a_name_and_genomic_data(self):
                 if re.search('[^ACGTNacgtn-]', str(record.seq))  != None:
                   print("Error with the input FASTA file: One of the sequences contains odd characters, only ACGTNacgtn- are permitted")
                   return False
-        if number_of_sequences <= 3:
-          print("Error with input FASTA file: you need more than 3 sequences to build a meaningful tree")
-          return False
         input_handle.close()
       return True
 
@@ -79,4 +76,4 @@ def are_sequence_names_unique(self):
           return False
         input_handle.close()
       return True
-
+
diff --git a/python/gubbins/__init__.py b/python/gubbins/__init__.py
@@ -18,7 +18,7 @@
 ## PACKAGE METADATA
 
 __project__ = "Gubbins"
-__version__ = "0.1"
+__version__ = "3.0"
 
 try:
     try: