Restructure pipeline tests and move pipeline linting into subfolder #3070
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…ting # Conflicts: # tests/utils.py
… move-pipeline-linting
mashehu
changed the title
mirpedrol
reviewed
Jul 17, 2024
mirpedrol
approved these changes
Jul 31, 2024
| elif component in self.update_config.get(self.modules_repo.remote_url, {}).get(install_dir, {}): | ||
| # If the component to update is in .nf-core.yml config file | ||
| config_entry = self.update_config[self.modules_repo.remote_url][install_dir].get(component) | ||
| if self.update_config is not None: |
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The previous UserWarning is still missing
1 task
…ting # Conflicts: # .pre-commit-config.yaml # CHANGELOG.md # nf_core/__main__.py # nf_core/commands_modules.py # nf_core/commands_subworkflows.py # nf_core/pipelines/create/create.py
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Trying out if I can clean up a bit the pytest setup to make them more similar to the component ones (and probably vice versa).