fix pytest by checking if modules_json exists

nf-core · May 6, 2024 · 65f7647 · 65f7647
1 parent f69fe30
commit 65f7647
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/nf_core/modules/lint/__init__.py b/nf_core/modules/lint/__init__.py
@@ -213,7 +213,7 @@ def lint_module(self, mod, progress_bar, registry, local=False, fix_version=Fals
 
         # Otherwise run all the lint tests
         else:
-            if self.repo_type == "pipeline":
+            if self.repo_type == "pipeline" and self.modules_json:
                 # Set correct sha
                 version = self.modules_json.get_module_version(mod.component_name, mod.repo_url, mod.org)
                 mod.git_sha = version

diff --git a/nf_core/subworkflows/lint/__init__.py b/nf_core/subworkflows/lint/__init__.py
@@ -207,7 +207,7 @@ def lint_subworkflow(self, swf, progress_bar, registry, local=False):
 
         # Otherwise run all the lint tests
         else:
-            if self.repo_type == "pipeline":
+            if self.repo_type == "pipeline" and self.modules_json:
                 # Set correct sha
                 version = self.modules_json.get_subworkflow_version(swf.component_name, swf.repo_url, swf.org)
                 swf.git_sha = version