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Add support for generating mag samplesheet #1884

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Add support for generating mag samplesheet

Add support for generating mag samplesheet #1884

Triggered via pull request October 14, 2024 11:39
@sofstamsofstam
synchronize #544
sofstam:generate-samplesheet
Status Cancelled
Total duration 6m 7s
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ci.yml

on: pull_request
Matrix: Run pipeline with test data
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42 errors
Run pipeline with test data (latest-everything, test)
Process completed with exit code 1.
Run pipeline with test data (23.04.0, test)
Process completed with exit code 1.
Run pipeline with test data (latest-everything, test_motus)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (latest-everything, test_motus)
The operation was canceled.
Run pipeline with test data (23.04.0, test_alternativepreprocessing)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (23.04.0, test_alternativepreprocessing)
The operation was canceled.
Run pipeline with test data (23.04.0, test_nopreprocessing)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (23.04.0, test_nopreprocessing)
The operation was canceled.
Run pipeline with test data (23.04.0, test_fastp)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (23.04.0, test_fastp)
The operation was canceled.
Run pipeline with test data (latest-everything, test_bbduk)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (23.04.0, test_falco)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (latest-everything, test_bbduk)
The operation was canceled.
Run pipeline with test data (23.04.0, test_falco)
The operation was canceled.
Run pipeline with test data (latest-everything, test_fastp)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (latest-everything, test_fastp)
The operation was canceled.
Run pipeline with test data (latest-everything, test_krakenuniq)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (latest-everything, test_krakenuniq)
The operation was canceled.
Run pipeline with test data (23.04.0, test_krakenuniq)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (23.04.0, test_krakenuniq)
The operation was canceled.
Run pipeline with test data (latest-everything, test_malt)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (latest-everything, test_malt)
The operation was canceled.
Run pipeline with test data (23.04.0, test_bbduk)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (23.04.0, test_bbduk)
The operation was canceled.
Run pipeline with test data (23.04.0, test_malt)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (23.04.0, test_malt)
The operation was canceled.
Run pipeline with test data (latest-everything, test_nopreprocessing)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (latest-everything, test_nopreprocessing)
The operation was canceled.
Run pipeline with test data (latest-everything, test_alternativepreprocessing)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (latest-everything, test_alternativepreprocessing)
The operation was canceled.
Run pipeline with test data (23.04.0, test_prinseqplusplus)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (23.04.0, test_prinseqplusplus)
The operation was canceled.
Run pipeline with test data (23.04.0, test_noprofiling)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (23.04.0, test_noprofiling)
The operation was canceled.
Run pipeline with test data (latest-everything, test_prinseqplusplus)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (latest-everything, test_prinseqplusplus)
The operation was canceled.
Run pipeline with test data (23.04.0, test_motus)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (23.04.0, test_motus)
The operation was canceled.
Run pipeline with test data (latest-everything, test_falco)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (latest-everything, test_falco)
The operation was canceled.
Run pipeline with test data (latest-everything, test_noprofiling)
Canceling since a higher priority waiting request for 'nf-core CI-544' exists
Run pipeline with test data (latest-everything, test_noprofiling)
The operation was canceled.