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first commit with kraken2 module
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ctuni committed Oct 28, 2024
1 parent 5bea1e5 commit 036daf0
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Showing 26 changed files with 1,290 additions and 6 deletions.
50 changes: 44 additions & 6 deletions modules.json
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Expand Up @@ -8,12 +8,44 @@
"fastqc": {
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"git_sha": "285a50500f9e02578d90b3ce6382ea3c30216acd",
"installed_by": ["modules"]
"installed_by": [
"modules"
]
},
"kraken2/kraken2": {
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"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
"installed_by": [
"modules"
]
},
"krona/ktimporttaxonomy": {
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"multiqc": {
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"untar": {
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"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
"installed_by": [
"modules"
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}
}
},
Expand All @@ -22,20 +54,26 @@
"utils_nextflow_pipeline": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"installed_by": ["subworkflows"]
"installed_by": [
"subworkflows"
]
},
"utils_nfcore_pipeline": {
"branch": "master",
"git_sha": "92de218a329bfc9a9033116eb5f65fd270e72ba3",
"installed_by": ["subworkflows"]
"installed_by": [
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]
},
"utils_nfvalidation_plugin": {
"branch": "master",
"git_sha": "5caf7640a9ef1d18d765d55339be751bb0969dfa",
"installed_by": ["subworkflows"]
"installed_by": [
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}
}
}
}
}
}
}
7 changes: 7 additions & 0 deletions modules/nf-core/kraken2/kraken2/environment.yml

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85 changes: 85 additions & 0 deletions modules/nf-core/kraken2/kraken2/main.nf

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99 changes: 99 additions & 0 deletions modules/nf-core/kraken2/kraken2/meta.yml

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