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Fix ECLint
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drpatelh committed Jun 7, 2023
1 parent 76b70d1 commit 9b30fb1
Showing 1 changed file with 37 additions and 37 deletions.
74 changes: 37 additions & 37 deletions conf/public_aws_ecr.config
Original file line number Diff line number Diff line change
Expand Up @@ -12,40 +12,40 @@ docker.registry = 'public.ecr.aws'
podman.registry = 'public.ecr.aws'

process {
withName: 'CELLRANGER_COUNT' {
container = 'quay.io/nf-core/cellranger:7.1.0'
}
withName: 'CELLRANGER_MKGTF' {
container = 'quay.io/nf-core/cellranger:7.1.0'
}
withName: 'CELLRANGER_MKREF' {
container = 'quay.io/nf-core/cellranger:7.1.0'
}
withName: 'CONCAT_H5AD' {
container = 'quay.io/biocontainers/scanpy:1.7.2--pyhdfd78af_0'
}
withName: 'GENE_MAP' {
container = 'quay.io/biocontainers/python:3.8.3'
}
withName: 'GTF_GENE_FILTER' {
container = 'quay.io/biocontainers/python:3.9--1'
}
withName: 'GUNZIP' {
container = 'quay.io/nf-core/ubuntu:20.04'
}
withName: 'MTX_TO_H5AD' {
container = 'quay.io/biocontainers/scanpy:1.7.2--pyhdfd78af_0'
}
withName: 'MTX_TO_SEURAT' {
container = 'quay.io/nf-core/seurat:4.3.0'
}
withName: 'SAMPLESHEET_CHECK' {
container = 'quay.io/biocontainers/python:3.8.3'
}
withName: 'STAR_GENOMEGENERATE' {
container = 'quay.io/biocontainers/mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:1df389393721fc66f3fd8778ad938ac711951107-0'
}
withName: 'UNIVERSC' {
container = 'quay.io/nf-core/universc:1.2.5.1'
}
}
withName: 'CELLRANGER_COUNT' {
container = 'quay.io/nf-core/cellranger:7.1.0'
}
withName: 'CELLRANGER_MKGTF' {
container = 'quay.io/nf-core/cellranger:7.1.0'
}
withName: 'CELLRANGER_MKREF' {
container = 'quay.io/nf-core/cellranger:7.1.0'
}
withName: 'CONCAT_H5AD' {
container = 'quay.io/biocontainers/scanpy:1.7.2--pyhdfd78af_0'
}
withName: 'GENE_MAP' {
container = 'quay.io/biocontainers/python:3.8.3'
}
withName: 'GTF_GENE_FILTER' {
container = 'quay.io/biocontainers/python:3.9--1'
}
withName: 'GUNZIP' {
container = 'quay.io/nf-core/ubuntu:20.04'
}
withName: 'MTX_TO_H5AD' {
container = 'quay.io/biocontainers/scanpy:1.7.2--pyhdfd78af_0'
}
withName: 'MTX_TO_SEURAT' {
container = 'quay.io/nf-core/seurat:4.3.0'
}
withName: 'SAMPLESHEET_CHECK' {
container = 'quay.io/biocontainers/python:3.8.3'
}
withName: 'STAR_GENOMEGENERATE' {
container = 'quay.io/biocontainers/mulled-v2-1fa26d1ce03c295fe2fdcf85831a92fbcbd7e8c2:1df389393721fc66f3fd8778ad938ac711951107-0'
}
withName: 'UNIVERSC' {
container = 'quay.io/nf-core/universc:1.2.5.1'
}
}

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