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add cnvkit index #661

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merged 4 commits into from
Jul 20, 2022
Merged

add cnvkit index #661

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70a559d
add cnvkit index
FriederikeHanssen Jul 19, 2022
84f8586
update changelog
FriederikeHanssen Jul 19, 2022
ab7b1fb
convert to text
FriederikeHanssen Jul 20, 2022
2fd6afd
Merge branch 'dev' into index_svg
maxulysse Jul 20, 2022
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -100,6 +100,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- [#651](https://github.com/nf-core/sarek/pull/651) - Added TIDDIT_SOMATIC subworkflow
- [#653](https://github.com/nf-core/sarek/pull/653) - Coherent results subfolder structure between preprocessing, variantcalling and reporting
- [#659](https://github.com/nf-core/sarek/pull/659) - Update usage.md docu section on `How to run ASCAT with WES`
- [#661](https://github.com/nf-core/sarek/pull/661) - Add cnvkit reference creation to index subway map
- [#663](https://github.com/nf-core/sarek/pull/663) - Add separate parameters for `ASCAT` and `ControlFREEC` back in

### Fixed
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