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2.6.1#222

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maxulysse merged 26 commits intonf-core:masternf-core/sarek:masterfrom maxulysse:2.6.1maxulysse/nf-core_sarek:2.6.1Copy head branch name to clipboardJun 23, 2020

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Commits on May 24, 2020

• bump version 3.0dev

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Commits on May 26, 2020

• Merge pull request nf-core#208 from MaxUlysse/dev

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Commits on Jun 2, 2020

• extend timeout for pushing to dockerhub

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• update CHANGELOG

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• Merge pull request nf-core#211 from MaxUlysse/dev

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• no aws test on forks

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• update CHANGELOG

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• update CHANGELOG

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Commits on Jun 3, 2020

• Merge pull request nf-core#212 from MaxUlysse/no_aws_test_on_forks

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Commits on Jun 4, 2020

• update GATK and fix Freebayes-Mutect2 channels issue

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Commits on Jun 5, 2020

• update CHANGELOG

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• Merge pull request nf-core#214 from MaxUlysse/Mutect2Freebayes

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Commits on Jun 16, 2020

• update aws tests GitHub actions workflows

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• update changelog

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• awstest update env var

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Commits on Jun 17, 2020

• awsfulltest fix s3 bucket env var

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• aws test update secrets names

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• Update CHANGELOG.md

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Commits on Jun 18, 2020

• Merge pull request nf-core#219 from ggabernet/awstest

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Commits on Jun 22, 2020

• Replace tmp_dir directory in BaseRecalibration

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• Merge pull request nf-core#221 from FriederikeHanssen/tmp

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• bump version to 2.6.1 (nf-core tools + manual)

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  51a9923

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• update CHANGELOG

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Commits on Jun 23, 2020

• aply changes from comments

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• Merge pull request nf-core#223 from MaxUlysse/2.6.1_PR_comments

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• Merge remote-tracking branch 'upstream/dev' into 2.6.1

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