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Update workflows/sarek/main.nf
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FriederikeHanssen authored Jul 30, 2024
1 parent 9f11b67 commit 425fb91
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion workflows/sarek/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -152,7 +152,7 @@ workflow SAREK {

if (params.step == 'mapping') {

// Figure out if input is bam or fastq
// Figure out if input is bam, fastq, or spring
input_sample_type = input_sample.branch{
bam: it[0].data_type == "bam"
fastq_gz: it[0].data_type == "fastq_gz"
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