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modified: assets/email_template.html
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AitorOP committed Aug 8, 2024
1 parent dd66b9d commit 3e445d0
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38 changes: 7 additions & 31 deletions assets/email_template.html
Original file line number Diff line number Diff line change
Expand Up @@ -4,21 +4,11 @@
<meta http-equiv="X-UA-Compatible" content="IE=edge" />
<meta name="viewport" content="width=device-width, initial-scale=1" />

<meta
name="description"
content="nf-core/sarek: An open-source analysis pipeline to detect germline or somatic variants from whole genome or targeted sequencing"
/>
<meta name="description" content="nf-core/sarek: An open-source analysis pipeline to detect germline or somatic variants from whole genome or targeted sequencing" />
<title>nf-core/sarek Pipeline Report</title>
</head>
<body>
<div
style="
font-family: Helvetica, Arial, sans-serif;
padding: 30px;
max-width: 800px;
margin: 0 auto;
"
>
<div style="font-family: Helvetica, Arial, sans-serif; padding: 30px; max-width: 800px; margin: 0 auto">
<img src="cid:nfcorepipelinelogo" />

<h1>nf-core/sarek ${version}</h1>
Expand All @@ -36,17 +26,10 @@ <h2>Run Name: $runName</h2>
border-radius: 4px;
"
>
<h4 style="margin-top: 0; color: inherit">
nf-core/sarek execution completed unsuccessfully!
</h4>
<p>
The exit status of the task that caused the workflow execution to fail
was: <code>$exitStatus</code>.
</p>
<h4 style="margin-top: 0; color: inherit">nf-core/sarek execution completed unsuccessfully!</h4>
<p>The exit status of the task that caused the workflow execution to fail was: <code>$exitStatus</code>.</p>
<p>The full error message was:</p>
<pre style="white-space: pre-wrap; overflow: visible; margin-bottom: 0">
${errorReport}</pre
>
<pre style="white-space: pre-wrap; overflow: visible; margin-bottom: 0">${errorReport}</pre>
</div>
""" } else { out << """
<div
Expand All @@ -64,10 +47,7 @@ <h4 style="margin-top: 0; color: inherit">
</div>
""" } %>

<p>
The workflow was completed at <strong>$dateComplete</strong> (duration:
<strong>$duration</strong>)
</p>
<p>The workflow was completed at <strong>$dateComplete</strong> (duration: <strong>$duration</strong>)</p>
<p>The command used to launch the workflow was as follows:</p>
<pre
style="
Expand Down Expand Up @@ -124,11 +104,7 @@ <h3>Pipeline Configuration:</h3>
</table>

<p>nf-core/sarek</p>
<p>
<a href="https://github.com/nf-core/sarek"
>https://github.com/nf-core/sarek</a
>
</p>
<p><a href="https://github.com/nf-core/sarek">https://github.com/nf-core/sarek</a></p>
</div>
</body>
</html>
3 changes: 0 additions & 3 deletions assets/email_template.html:Zone.Identifier

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