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Fix null value for joint calling with Mutect2 #5158

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Fix null value for joint calling with Mutect2

Fix null value for joint calling with Mutect2 #5158

Run time

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Job Run time
Check for changes
9s
default docker NF 23.04.0
4m 36s
default docker NF latest-everything
7m 2s
tumor_normal_pair docker NF 23.04.0
6m 4s
tumor_normal_pair docker NF latest-everything
4m 50s
save_mapped_only docker NF 23.04.0
6m 56s
save_mapped_only docker NF latest-everything
6m 8s
save_output_as_bam_only docker NF 23.04.0
4m 36s
save_output_as_bam_only docker NF latest-everything
5m 5s
skip_all_qc docker NF 23.04.0
5m 26s
skip_all_qc docker NF latest-everything
5m 8s
skip_markduplicates docker NF 23.04.0
12m 25s
skip_markduplicates docker NF latest-everything
11m 23s
validation_checks docker NF 23.04.0
1m 1s
validation_checks docker NF latest-everything
41s
mutect2 docker NF 23.04.0
18m 32s
mutect2 docker NF latest-everything
17m 56s
confirm-pass
4s
1h 58m 2s