Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Important! Template update for nf-core/tools v2.13.1 #36

Merged
merged 20 commits into from
Mar 19, 2024
Merged

Important! Template update for nf-core/tools v2.13.1 #36

merged 20 commits into from
Mar 19, 2024

Commits on Feb 20, 2024

  1. Template update for nf-core/tools version 2.13

    @nf-core-bot
    nf-core-bot committed Feb 20, 2024
    Configuration menu
    Copy the full SHA
    c76d69d View commit details
    Browse the repository at this point in the history

Commits on Feb 29, 2024

  1. Template update for nf-core/tools version 2.13.1

    @nf-core-bot
    nf-core-bot committed Feb 29, 2024
    Configuration menu
    Copy the full SHA
    e7168fd View commit details
    Browse the repository at this point in the history

Commits on Mar 15, 2024

  1. Update schema_input.json

    @a4000
    a4000 authored Mar 15, 2024
    Configuration menu
    Copy the full SHA
    9aa5de6 View commit details
    Browse the repository at this point in the history

  2. remove fastq from samplesheet template update

    @a4000
    a4000 authored Mar 15, 2024
    Configuration menu
    Copy the full SHA
    2f3b761 View commit details
    Browse the repository at this point in the history

  3. added input to test profile

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    ee274a8 View commit details
    Browse the repository at this point in the history

  4. Merge remote-tracking branch 'origin/dev' into nf-core-template-merge… 

    …-2.13.1
    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    31072e7 View commit details
    Browse the repository at this point in the history

  5. install nf-test in git workflow

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    0d7fabd View commit details
    Browse the repository at this point in the history

  6. merged new template changes with readsimulator main workflow

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    d84f765 View commit details
    Browse the repository at this point in the history

  7. removed include customdumpsoftwareversion

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    3f7bb2c View commit details
    Browse the repository at this point in the history

  8. change paths in nf-test tags

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    6d004d3 View commit details
    Browse the repository at this point in the history

  9. removed one more reference to ch_input

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    be16150 View commit details
    Browse the repository at this point in the history

  10. changed nf-test snapshots to include chenges with template update

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    08d3214 View commit details
    Browse the repository at this point in the history

  11. changed multiqc snapshot

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    bcca4eb View commit details
    Browse the repository at this point in the history

  12. removed section that was removed with template change

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    f44e82e View commit details
    Browse the repository at this point in the history

  13. resolved merge conflicts

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    9a3fb91 View commit details
    Browse the repository at this point in the history

  14. changing multiqc md5

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    926d28a View commit details
    Browse the repository at this point in the history

  15. adding outdir to amplicon test

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    e9c44bf View commit details
    Browse the repository at this point in the history

  16. added outdir to other tests

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    4f82fe9 View commit details
    Browse the repository at this point in the history

  17. fixed parameter names in amplicon test

    @a4000
    a4000 committed Mar 15, 2024
    Configuration menu
    Copy the full SHA
    2aedae2 View commit details
    Browse the repository at this point in the history

Commits on Mar 19, 2024

  1. Updated workflow tests to exclude multiqc_report

    @CarsonJM
    CarsonJM committed Mar 19, 2024
    Configuration menu
    Copy the full SHA
    a442554 View commit details
    Browse the repository at this point in the history