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Removed -stub option from download_pipeline.yml command
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a4000 authored Apr 2, 2024
1 parent db895f7 commit f42fb59
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion .github/workflows/download_pipeline.yml
Original file line number Diff line number Diff line change
Expand Up @@ -69,4 +69,4 @@ jobs:
env:
NXF_SINGULARITY_CACHEDIR: ./
NXF_SINGULARITY_HOME_MOUNT: true
run: nextflow run ./${{ env.REPOTITLE_LOWERCASE }}/$( sed 's/\W/_/g' <<< ${{ env.REPO_BRANCH }}) -stub -profile test,singularity --outdir ./results --input https://raw.githubusercontent.com/nf-core/test-datasets/readsimulator/samplesheet/test_samplesheet.csv
run: nextflow run ./${{ env.REPOTITLE_LOWERCASE }}/$( sed 's/\W/_/g' <<< ${{ env.REPO_BRANCH }}) -profile test,singularity --outdir ./results

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