Update modules: rgi #8715
jasmezztest.yml
on: pull_request
Matrix: nf-test
Matrix: nf-core-lint
Matrix: pytest
confirm-pass
0s
Annotations
6 warnings
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pytest-changes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: mirpedrol/paths-filter@main. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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nf-test-changes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: mirpedrol/paths-filter@main. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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pre-commit
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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nf-test (rgi/cardannotation, singularity)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: eWaterCycle/setup-apptainer@main. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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nf-test (rgi/main, singularity)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: eWaterCycle/setup-apptainer@main. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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nf-test (rgi/main, conda)
Exception ignored in: <module 'threading' from '/home/ubuntu/miniconda3/install_tmp/_MEIgKINQi/threading.pyc'>
Traceback (most recent call last):
File "threading.py", line 1537, in _shutdown
File "concurrent/futures/process.py", line 93, in _python_exit
File "concurrent/futures/process.py", line 79, in wakeup
File "multiprocessing/connection.py", line 200, in send_bytes
File "multiprocessing/connection.py", line 411, in _send_bytes
File "multiprocessing/connection.py", line 368, in _send
OSError: [Errno 9] Bad file descriptor
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