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Longest isoform and GFFREAD #20

Merged
merged 2 commits into from
Oct 17, 2024
Merged

Longest isoform and GFFREAD #20

merged 2 commits into from
Oct 17, 2024

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FernandoDuarteF
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Hi @chriswyatt1

I added the longest isoform module from the synteny pipeline, as well as the GFFREAD module from nf-core. I also added the PIGZ module to uncompress files if necessary, as the GFFREAD module does not work with compressed files (issue #18).

The solution for compressed files is not pretty, but it works for now.

I think this is ready to be merged.

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@chriswyatt1 chriswyatt1 left a comment

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Great, that all looks good.

@chriswyatt1 chriswyatt1 merged commit 5c4f54d into dev Oct 17, 2024
@chriswyatt1 chriswyatt1 deleted the longest_isoform branch October 18, 2024 09:31
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2 participants