Skip to content

Commit

Permalink
update snapshot
Browse files Browse the repository at this point in the history
  • Loading branch information
maxulysse committed Oct 31, 2023
1 parent 48304c0 commit 2b8df8a
Show file tree
Hide file tree
Showing 2 changed files with 33 additions and 33 deletions.
10 changes: 5 additions & 5 deletions tests/pipeline/bclconvert.nf.test.snap
Original file line number Diff line number Diff line change
Expand Up @@ -2,9 +2,9 @@
"bclconvert": {
"content": [
"Sample1_S1_L001.fastp.fastq.gz:md5,8a723787b4a0c0fbf5b81d3a0b989c69",
"Sample1_S1_L001_R1_001.fastq.gz:md5,0a0341e2990b4fa1d9ad4b4c603144c1",
"Sample1_S1_L001_R1_001.fastq.gz:md5,a0c1359a2c922967660524a6e77db494",
"Sample1_S1_L001_summary.txt:md5,510c6b8a26ff8d530950c05b3ca5a1c6",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,febef808ae5397ea4ee7ee40e5fd39e0",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,163be0a88c70ca629fd516dbaadad96a",
[
"Adapter_Cycle_Metrics.csv:md5,5a0c88793b4a0885fe3dda16609b576e",
"Adapter_Metrics.csv:md5,989240b8840b2169ac1061f952c90f6c",
Expand All @@ -20,13 +20,13 @@
"fastq_list.csv:md5,05bc84f51840f5754cfb8381b36f2cb0"
]
],
"timestamp": "2023-10-17T07:59:12+0000"
"timestamp": "2023-10-31T12:33:16.768754"
},
"software_versions": {
"content": [
"{BCLCONVERT={bclconvert=00.000.000.4.0.3}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0dev}}"
"{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0dev}}"
],
"timestamp": "2023-10-17T07:59:12+0000"
"timestamp": "2023-10-31T12:33:16.074351"
},
"multiqc": {
"content": [
Expand Down
56 changes: 28 additions & 28 deletions tests/pipeline/skip_tools.nf.test.snap
Original file line number Diff line number Diff line change
@@ -1,15 +1,15 @@
{
"software_versions_skip_trimming": {
"content": [
"{BCLCONVERT={bclconvert=00.000.000.4.0.3}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0dev}}"
"{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0dev}}"
],
"timestamp": "2023-10-17T08:05:28+0000"
"timestamp": "2023-10-31T12:40:12.308416"
},
"skip_fastqc": {
"content": [
"Sample1_S1_L001_R1_001.fastq.gz:md5,0a0341e2990b4fa1d9ad4b4c603144c1",
"Sample1_S1_L001_R1_001.fastq.gz:md5,a0c1359a2c922967660524a6e77db494",
"Sample1_S1_L001.fastp.fastq.gz.md5:md5,c3cd96f3a22fb6afbaa1df324814d54c",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,febef808ae5397ea4ee7ee40e5fd39e0",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,163be0a88c70ca629fd516dbaadad96a",
[
"Adapter_Cycle_Metrics.csv:md5,5a0c88793b4a0885fe3dda16609b576e",
"Adapter_Metrics.csv:md5,989240b8840b2169ac1061f952c90f6c",
Expand All @@ -25,13 +25,13 @@
"fastq_list.csv:md5,05bc84f51840f5754cfb8381b36f2cb0"
]
],
"timestamp": "2023-10-17T08:05:28+0000"
"timestamp": "2023-10-31T12:41:59.969786"
},
"skip_fastp": {
"content": [
"Sample1_S1_L001_R1_001.fastq.gz:md5,0a0341e2990b4fa1d9ad4b4c603144c1",
"Sample1_S1_L001_R1_001.fastq.gz.md5:md5,c547a3c03e7c60c871d78018ec5d933f",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,febef808ae5397ea4ee7ee40e5fd39e0",
"Sample1_S1_L001_R1_001.fastq.gz:md5,a0c1359a2c922967660524a6e77db494",
"Sample1_S1_L001_R1_001.fastq.gz.md5:md5,10295d4e5ca66dae7788bbf24886cded",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,163be0a88c70ca629fd516dbaadad96a",
[
"Adapter_Cycle_Metrics.csv:md5,5a0c88793b4a0885fe3dda16609b576e",
"Adapter_Metrics.csv:md5,989240b8840b2169ac1061f952c90f6c",
Expand All @@ -47,13 +47,13 @@
"fastq_list.csv:md5,05bc84f51840f5754cfb8381b36f2cb0"
]
],
"timestamp": "2023-10-17T08:05:28+0000"
"timestamp": "2023-10-31T12:40:44.801689"
},
"skip_multiqc": {
"content": [
"Sample1_S1_L001_R1_001.fastq.gz:md5,0a0341e2990b4fa1d9ad4b4c603144c1",
"Sample1_S1_L001_R1_001.fastq.gz:md5,a0c1359a2c922967660524a6e77db494",
"Sample1_S1_L001.fastp.fastq.gz.md5:md5,c3cd96f3a22fb6afbaa1df324814d54c",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,febef808ae5397ea4ee7ee40e5fd39e0",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,163be0a88c70ca629fd516dbaadad96a",
[
"Adapter_Cycle_Metrics.csv:md5,5a0c88793b4a0885fe3dda16609b576e",
"Adapter_Metrics.csv:md5,989240b8840b2169ac1061f952c90f6c",
Expand All @@ -69,13 +69,13 @@
"fastq_list.csv:md5,05bc84f51840f5754cfb8381b36f2cb0"
]
],
"timestamp": "2023-10-17T08:05:28+0000"
"timestamp": "2023-10-31T12:43:37.155748"
},
"skip_fastp_fastqc": {
"content": [
"Sample1_S1_L001_R1_001.fastq.gz:md5,0a0341e2990b4fa1d9ad4b4c603144c1",
"Sample1_S1_L001_R1_001.fastq.gz.md5:md5,c547a3c03e7c60c871d78018ec5d933f",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,febef808ae5397ea4ee7ee40e5fd39e0",
"Sample1_S1_L001_R1_001.fastq.gz:md5,a0c1359a2c922967660524a6e77db494",
"Sample1_S1_L001_R1_001.fastq.gz.md5:md5,10295d4e5ca66dae7788bbf24886cded",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,163be0a88c70ca629fd516dbaadad96a",
[
"Adapter_Cycle_Metrics.csv:md5,5a0c88793b4a0885fe3dda16609b576e",
"Adapter_Metrics.csv:md5,989240b8840b2169ac1061f952c90f6c",
Expand All @@ -91,37 +91,37 @@
"fastq_list.csv:md5,05bc84f51840f5754cfb8381b36f2cb0"
]
],
"timestamp": "2023-10-17T08:05:28+0000"
"timestamp": "2023-10-31T12:42:35.089011"
},
"software_versions_skip_fastqc": {
"content": [
"{BCLCONVERT={bclconvert=00.000.000.4.0.3}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0dev}}"
"{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0dev}}"
],
"timestamp": "2023-10-17T08:05:28+0000"
"timestamp": "2023-10-31T12:41:58.993732"
},
"software_versions_skip_fastp_fastqc": {
"content": [
"{BCLCONVERT={bclconvert=00.000.000.4.0.3}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.4.0dev}}"
"{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.4.0dev}}"
],
"timestamp": "2023-10-17T08:05:28+0000"
"timestamp": "2023-10-31T12:42:33.138684"
},
"software_versions_skip_multiqc": {
"content": [
"{BCLCONVERT={bclconvert=00.000.000.4.0.3}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0dev}}"
"{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, FASTP={fastp=0.23.4}, Workflow={nf-core/demultiplex=1.4.0dev}}"
],
"timestamp": "2023-10-17T08:05:28+0000"
"timestamp": "2023-10-31T12:43:35.278888"
},
"software_versions_skip_fastp": {
"content": [
"{BCLCONVERT={bclconvert=00.000.000.4.0.3}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.4.0dev}}"
"{BCLCONVERT={bclconvert=00.000.000.4.2.4}, CUSTOM_DUMPSOFTWAREVERSIONS={python=3.11.4, yaml=6.0}, FALCO={falco=1.2.1}, Workflow={nf-core/demultiplex=1.4.0dev}}"
],
"timestamp": "2023-10-17T08:05:28+0000"
"timestamp": "2023-10-31T12:40:44.187338"
},
"skip_trimming": {
"content": [
"Sample1_S1_L001_R1_001.fastq.gz:md5,0a0341e2990b4fa1d9ad4b4c603144c1",
"Sample1_S1_L001_R1_001.fastq.gz.md5:md5,c547a3c03e7c60c871d78018ec5d933f",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,febef808ae5397ea4ee7ee40e5fd39e0",
"Sample1_S1_L001_R1_001.fastq.gz:md5,a0c1359a2c922967660524a6e77db494",
"Sample1_S1_L001_R1_001.fastq.gz.md5:md5,10295d4e5ca66dae7788bbf24886cded",
"Undetermined_S0_L001_R1_001.fastq.gz:md5,163be0a88c70ca629fd516dbaadad96a",
[
"Adapter_Cycle_Metrics.csv:md5,5a0c88793b4a0885fe3dda16609b576e",
"Adapter_Metrics.csv:md5,989240b8840b2169ac1061f952c90f6c",
Expand All @@ -137,6 +137,6 @@
"fastq_list.csv:md5,05bc84f51840f5754cfb8381b36f2cb0"
]
],
"timestamp": "2023-10-17T08:05:28+0000"
"timestamp": "2023-10-31T12:40:12.565447"
}
}

0 comments on commit 2b8df8a

Please sign in to comment.