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Important! Template update for nf-core/tools v2.8 #21

Merged
merged 10 commits into from
Jun 28, 2023
Merged

Important! Template update for nf-core/tools v2.8 #21

merged 10 commits into from
Jun 28, 2023

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Version 2.8 of nf-core/tools has just been released with updates to the nf-core template. This automated pull-request attempts to apply the relevant updates to this pipeline.

Please make sure to merge this pull-request as soon as possible, resolving any merge conflicts in the nf-core-template-merge-2.8 branch (or your own fork, if you prefer). Once complete, make a new minor release of your pipeline.

For instructions on how to merge this PR, please see https://nf-co.re/developers/sync.

For more information about this release of nf-core/tools, please see the v2.8 release page.

@nf-core-bot nf-core-bot mentioned this pull request Apr 28, 2023
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github-actions bot commented Jun 28, 2023 •
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nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit 919b75e

+| ✅ 157 tests passed       |+
#| ❔  17 tests were ignored |#
!| ❗   3 tests had warnings |!

❗ Test warnings:

  • pipeline_todos - TODO string in README.md: If applicable, make list of people who have also contributed
  • pipeline_todos - TODO string in WorkflowMain.groovy: Add Zenodo DOI for pipeline after first release
  • pipeline_todos - TODO string in methods_description_template.yml: #Update the HTML below to your prefered methods description, e.g. add publication citation for this pipeline

❔ Tests ignored:

✅ Tests passed:

Run details

  • nf-core/tools version 2.8
  • Run at 2023-06-28 12:27:55

mirpedrol
mirpedrol reviewed Jun 28, 2023
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@mirpedrol mirpedrol merged commit 17d63fb into dev Jun 28, 2023
@mirpedrol mirpedrol deleted the nf-core-template-merge-2.8 branch June 28, 2023 12:44
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@mirpedrol mirpedrol mirpedrol left review comments

@LaurenceKuhl LaurenceKuhl LaurenceKuhl approved these changes

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@nf-core-bot @mirpedrol @LaurenceKuhl