Update config file #697
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Update config file #697
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jfy133
approved these changes
May 24, 2024
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| nf-core pipelines have been successfully configured for use on the Rosalind UGE cluster. | ||
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| To use the Rosalind profile, run the pipeline with `-profile rosalind_uge`. This will download and apply ['rosalind_uge.config'](../conf/rosalind_uge.config) which has been configured for the Rosalind HPC cluster. This profile will allow all Nextflow processes to run within singularity containers, which will be downloaded and converted from docker containers, if needed. | ||
| To use the Rosalind profile, run the pipeline with `-profile rosalind_uge`. This will download and apply ['rosalind_uge.config'](../conf/rosalind_uge.config) which has been configured for the UGE cluster. This profile will allow all Nextflow processes to run within singularity containers, which will be downloaded and converted from docker containers, if needed. |
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Are there multiple clusters under the 'Rosalind' name?
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Ope, I click and type too fast. Can we leave it for now since it is only in the doc?
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name: New Config
about: A new cluster config
Please follow these steps before submitting your PR:
[WIP]in its titlemasterbranchSteps for adding a new config profile:
conf/directorydocs/directorynfcore_custom.configfile in the top-level directoryREADME.mdfile in the top-level directoryprofile:scope in.github/workflows/main.ymlSmall updates to the config and docs for rosalind_uge.config as it is used in multiple institutions by removing reference to support contact