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Update immcantation container #296

Merged
merged 2 commits into from
Jan 16, 2024
Merged

Update immcantation container #296

merged 2 commits into from
Jan 16, 2024

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ggabernet
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  • update immcantation/airrflow container
  • update changelog

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • If necessary, also make a PR on the nf-core/airrflow branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

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github-actions bot commented Jan 16, 2024 •
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nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit 28cdf5b

+| ✅ 162 tests passed       |+
#| ❔   1 tests were ignored |#
!| ❗   1 tests had warnings |!

❗ Test warnings:

  • pipeline_todos - TODO string in methods_description_template.yml: #Update the HTML below to your preferred methods description, e.g. add publication citation for this pipeline

❔ Tests ignored:

✅ Tests passed:

Run details

  • nf-core/tools version 2.11.1
  • Run at 2024-01-16 19:48:55

@ggabernet ggabernet merged commit 1e57171 into nf-core:dev Jan 16, 2024
24 checks passed
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@ssnn-airr ssnn-airr ssnn-airr approved these changes

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@ggabernet @ssnn-airr