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Remove gisaid_epi_isl from auspice_config JSONs #188

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merged 1 commit into from
Oct 18, 2024

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@joverlee521 joverlee521 commented Oct 18, 2024

Description of proposed changes

Temporarily dropping gisaid_epi_isl after discussion on Slack¹ about the duplicate accessions we are seeing with cell/egg passaged sequences. Once we update the data model to accurately link virus record and sequence record, we can add it back.

¹ https://bedfordlab.slack.com/archives/C03KWDET9/p1729271930916079

Related issue(s)

Follow up to #180
Related to nextstrain/fauna#165

Checklist

Temporarily dropping `gisaid_epi_isl` after discussion on Slack¹
about the duplicate accessions we are seeing with cell/egg passaged
sequences. Once we update the data model to accurately link virus
record and sequence record, we can add it back.

¹ <https://bedfordlab.slack.com/archives/C03KWDET9/p1729271930916079>
@joverlee521 joverlee521 merged commit 93393d4 into master Oct 18, 2024
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@joverlee521 joverlee521 deleted the drop-gisaid-epi-isl branch October 18, 2024 22:24
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2 participants