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v1.14.0

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@jameshadfield jameshadfield released this 27 Feb 20:01
· 3240 commits to master since this release

Features

  • Strain search (using awesomplete).
    This highlights the path to a single tip and increases the tip radius.
    Strain is stored in the URL query (s=...) and can be restored via URL.
    Selected strain also appears in the info panel (top of screen).
  • Amino acid branch labels (for every tree) as well as clade labels if specified by the clade_annotation attribute.
    AA labels are shown where the descendent visible tips account for more than 5% of the total visible tips (same as nextflu).
    Clade labels are always displayed.
  • Default geneotype gene is now HA1 if available (previously nucleotide).
  • ColorBy ordering (sidebar dropdown) is now ordered (via an array in globals.js)

Internals

  • The JSON processing on initial load has been shifted from the reducers to a single action - fewer dispatches, fewer potential bugs, faster code.
  • Frequencies are initialised in a single action (previously 2).
  • tip-frequencies are now downloaded via get_data.sh
  • Frequency actions are not dispatched unless the frequency panel is loaded.