Support pandas v2 #2994

Job	Run time
mypy	50s
pathogen-repo-ci (dengue)	2m 53s
pathogen-repo-ci-v0 (avian-flu)	50s
pyright	16s
pathogen-repo-ci (lassa)	41s
test (python=3.8 biopython=1.80)	5m 46s
pathogen-repo-ci-v0 (ebola)	52s
pathogen-repo-ci (measles)	1m 23s
test (python=3.8 biopython=latest)	5m 39s
pathogen-repo-ci-v0 (mumps)	53s
test (python=3.9 biopython=1.80)	6m 11s
pathogen-repo-ci (mpox)	1m 26s
pathogen-repo-ci-v0 (ncov)	56s
test (python=3.9 biopython=latest)	6m 19s
pathogen-repo-ci (seasonal-cov)	1m 51s
pathogen-repo-ci-v0 (rsv)	8m 40s
test (python=3.10 biopython=1.80)	6m 19s
pathogen-repo-ci (zika)	59s
test (python=3.10 biopython=latest)	6m 14s
pathogen-repo-ci-v0 (seasonal-flu)	1m 16s
pathogen-repo-ci-v0 (tb)	1m 13s
test (python=3.11 biopython=1.80)	6m 1s
check-docs	32s
test (python=3.11 biopython=latest)	6m 2s
build-docs / build	2m 13s
codecov	19s
release	0s
rebuild-docker-image	0s
	1h 16m 34s

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