These are some tools that I used to process HBM and HBM-ERGOM data.
Please be aware that the format of HBM binary restart files changed over time. Therefore, some tools are only working with specific versions of the HBM.
This code was written by Daniel Neumann at the Leibniz-Institut for Baltic Sea Research Warnemuende (www.io-warnemuende.de/daniel-neumann.html). The work was done within the project MeRamo (funded by BMVI, FKZ 50EW1601).
- add_tracer_bio_restart
- calc_grid_cell_size
- calc_n_distribution
- change_start_date_bio_restart
- change_start_date_restart
- create_mask
- integrate_layer_depth
- remove_silicate_bio_restart
- reset_silicate_bio_restart
- switch_order_bnds_bio_restart
DEPRECATED. DON'T USE.
Left here as a source for ideas.
See HELP output. TODO: Copy -h output here.
See HELP output. TODO: Copy -h output here.
Please use change_start_date_restart instead. change_start_date_restart is more rebust. change_start_date_bio_restart possibly does not work with the current HBM-ERGOM binary bio_restart files.
TODO
See HELP output. TODO: Copy -h output here.
See HELP output. TODO: Copy -h output here.
Removed the tracer silicate from binary bio_restart files of HBM-ERGOM. Does not work with the 2018s version of HBM-ERGOM anymore because the alignment of data at the boundaries was changed. Needs a bio_restart file with 13 tracers. Silicate needs to be bio tracer number 4.
Resets the tracer silicate in binary bio_restart files of HBM-ERGOM to the silicate values of another binary bio_restart file. Does not work with the 2018s version of HBM-ERGOM anymore because the alignment of data at the boundaries was changed. The source bio_restart file, from which silicate data are copied, needs to have with 13 tracers. The source bio_restart file, from which all other tracers' data are copied, needs to have with 31 tracers (first 13 are equal). Silicate needs to be bio tracer number 4.
Convert a binary bio_restart file of a HBM-ERGOM version of 2017 and before into a binary bio_restart file for a HBM-ERGOM version of late 2017 and later years. The alignment of boundary data was changed in later 2017.