Mirror files updated (outputs removed, metadata filtered)

#208

tests/notebooks/mirror/ipynb_to_pandoc/Notebook with function and cell metadata 164.md

@@ -1,45 +1,43 @@
-::: {.cell .code execution_count="1"}
+---
+jupyter:
+  kernelspec:
+    display_name: Python 3
+    language: python
+    name: python3
+  nbformat: 4
+  nbformat_minor: 2
+---
+
+::: {.cell .code}
 ``` {.python}
 1 + 1
 ```
-
-::: {.output .execute_result execution_count="1"}
-    2
-:::
 :::
 
 ::: {.cell .markdown}
-A markdown cell And below, the cell for function f has non trivial cell
-metadata. And the next cell as well.
+A markdown cell
+And below, the cell for function f has non trivial cell metadata. And the next cell as well.
 :::
 
-::: {.cell .code execution_count="2" attributes="{"n":"10","id":"","classes":[]}"}
+::: {.cell .code attributes="{"n":"10","id":"","classes":[]}"}
 ``` {.python}
 def f(x):
     return x
 ```
 :::
 
-::: {.cell .code execution_count="3" attributes="{"n":"10","id":"","classes":[]}"}
+::: {.cell .code attributes="{"n":"10","id":"","classes":[]}"}
 ``` {.python}
 f(5)
 ```
-
-::: {.output .execute_result execution_count="3"}
-    5
-:::
 :::
 
 ::: {.cell .markdown}
 More text
 :::
 
-::: {.cell .code execution_count="4"}
+::: {.cell .code}
 ``` {.python}
 2 + 2
 ```
-
-::: {.output .execute_result execution_count="4"}
-    4
-:::
 :::

tests/notebooks/mirror/ipynb_to_pandoc/Notebook with html and latex cells.md

@@ -1,55 +1,45 @@
-::: {.cell .code execution_count="1"}
+---
+jupyter:
+  kernelspec:
+    display_name: Python 3
+    language: python
+    name: python3
+  nbformat: 4
+  nbformat_minor: 2
+---
+
+::: {.cell .code}
 ``` {.python}
 %%html
 <p><a href="https://github.com/mwouts/jupytext", style="color: rgb(0,0,255)">Jupytext</a> on GitHub</p>
 ```
-
-::: {.output .display_data}
-<p><a href="https://github.com/mwouts/jupytext", style="color: rgb(0,0,255)">Jupytext</a> on GitHub</p>
-:::
 :::
 
-::: {.cell .code execution_count="2"}
+::: {.cell .code}
 ``` {.python}
 %%latex
 $\frac{\pi}{2}$
 ```
-
-::: {.output .display_data}
-$\frac{\pi}{2}$
-:::
 :::
 
-::: {.cell .code execution_count="3"}
+::: {.cell .code}
 ``` {.python}
 %load_ext rpy2.ipython
 ```
 :::
 
-::: {.cell .code execution_count="4"}
+::: {.cell .code}
 ``` {.python}
 %%R
 library(ggplot2)
 ggplot(data=data.frame(x=c('A', 'B'), y=c(5, 2)), aes(x,weight=y)) + geom_bar()
 ```
-
-::: {.output .display_data}
-![](7f97cecde4f72e650de2f3937ac4999467e76306.png)
-:::
 :::
 
-::: {.cell .code execution_count="5"}
+::: {.cell .code}
 ``` {.python}
 %matplotlib inline
 import pandas as pd
 pd.Series({'A':5, 'B':2}).plot(figsize=(3,2), kind='bar')
 ```
-
-::: {.output .execute_result execution_count="5"}
-    <matplotlib.axes._subplots.AxesSubplot at 0x2da0c41a9e8>
-:::
-
-::: {.output .display_data}
-![](9344ac2b35133877848c9a89b2fbbcc3dcce81e0.png)
-:::
 :::

tests/notebooks/mirror/ipynb_to_pandoc/Notebook with many hash signs.md

@@ -1,13 +1,23 @@
+---
+jupyter:
+  kernelspec:
+    display_name: Python 3
+    language: python
+    name: python3
+  nbformat: 4
+  nbformat_minor: 2
+---
+
 ::: {.cell .markdown}
 ################################################################## 
 
-This is a notebook that contains many hash signs. Hopefully its python
-representation is not recognized as a Sphinx Gallery script\...
+This is a notebook that contains many hash signs.
+Hopefully its python representation is not recognized as a Sphinx Gallery script\...
 
 ################################################################## 
 :::
 
-::: {.cell .code execution_count="1"}
+::: {.cell .code}
 ``` {.python}
 some = 1
 code = 2
@@ -18,17 +28,13 @@ some+code
 ##################################################################
 # Another comment
 ```
-
-::: {.output .execute_result execution_count="1"}
-    3
-:::
 :::
 
 ::: {.cell .markdown}
 ##################################################################  {#section}
 
-This is a notebook that contains many hash signs. Hopefully its python
-representation is not recognized as a Sphinx Gallery script\...
+This is a notebook that contains many hash signs.
+Hopefully its python representation is not recognized as a Sphinx Gallery script\...
 
 ##################################################################  {#section-1}
 :::

tests/notebooks/mirror/ipynb_to_pandoc/Notebook with metadata and long cells.md

@@ -1,3 +1,13 @@
+---
+jupyter:
+  kernelspec:
+    display_name: Python 3
+    language: python
+    name: python3
+  nbformat: 4
+  nbformat_minor: 2
+---
+
 ::: {.cell .markdown}
 # Part one - various cells
 :::
@@ -9,7 +19,8 @@ with two blank lines
 :::
 
 ::: {.cell .markdown}
-Now we have a markdown cell with a code block inside it
+Now we have a markdown cell
+with a code block inside it
 
 ``` {.python}
 1 + 1
@@ -18,17 +29,13 @@ Now we have a markdown cell with a code block inside it
 After that cell we\'ll have a code cell
 :::
 
-::: {.cell .code execution_count="1"}
+::: {.cell .code}
 ``` {.python}
 2 + 2
 
 
 3 + 3
 ```
-
-::: {.output .execute_result execution_count="1"}
-    6
-:::
 :::
 
 ::: {.cell .markdown}
@@ -51,14 +58,10 @@ of the raw cell
 This is a markdown cell with cell metadata `{"key": "value"}`
 :::
 
-::: {.cell .code execution_count="2" .class="null" tags="["parameters"]"}
+::: {.cell .code .class="null" tags="["parameters"]"}
 ``` {.python}
 """This is a code cell with metadata `{"tags":["parameters"], ".class":null}`"""
 ```
-
-::: {.output .execute_result execution_count="2"}
-    'This is a code cell with metadata `{"tags":["parameters"], ".class":null}`'
-:::
 :::
 
 ::: {.cell .raw key="value"}

tests/notebooks/mirror/ipynb_to_pandoc/Notebook_with_R_magic.md

@@ -1,45 +1,46 @@
+---
+jupyter:
+  kernelspec:
+    display_name: Python 2
+    language: python
+    name: python2
+  nbformat: 4
+  nbformat_minor: 2
+---
+
 ::: {.cell .markdown}
 # A notebook with R cells
 
 This notebook shows the use of R cells to generate plots
 :::
 
-::: {.cell .code execution_count="1"}
+::: {.cell .code}
 ``` {.python}
 %load_ext rpy2.ipython
 ```
 :::
 
-::: {.cell .code execution_count="2"}
+::: {.cell .code}
 ``` {.python}
 %%R
 suppressMessages(require(tidyverse))
 ```
 :::
 
-::: {.cell .code execution_count="3"}
+::: {.cell .code}
 ``` {.python}
 %%R
 ggplot(iris, aes(x = Sepal.Length, y = Petal.Length, color=Species)) + geom_point()
 ```
-
-::: {.output .display_data}
-![](3fc4493185b3637a4127483394ece754faff16c7.png)
-:::
 :::
 
 ::: {.cell .markdown}
-The default plot dimensions are not good for us, so we use the -w and -h
-parameters in %%R magic to set the plot size
+The default plot dimensions are not good for us, so we use the -w and -h parameters in %%R magic to set the plot size
 :::
 
-::: {.cell .code execution_count="4"}
+::: {.cell .code}
 ``` {.python}
 %%R -w 400 -h 240
 ggplot(iris, aes(x = Sepal.Length, y = Petal.Length, color=Species)) + geom_point()
 ```
-
-::: {.output .display_data}
-![](92a00f6aa6af61f269e4b4a9db7fe31d5f8b1dbb.png)
-:::
 :::

tests/notebooks/mirror/ipynb_to_pandoc/Notebook_with_more_R_magic_111.md

@@ -1,4 +1,14 @@
-::: {.cell .code execution_count="1"}
+---
+jupyter:
+  kernelspec:
+    display_name: Python 3
+    language: python
+    name: python3
+  nbformat: 4
+  nbformat_minor: 2
+---
+
+::: {.cell .code}
 ``` {.python}
 %load_ext rpy2.ipython
 import pandas as pd
@@ -14,19 +24,10 @@ df = pd.DataFrame(
 ```
 :::
 
-::: {.cell .code execution_count="2"}
+::: {.cell .code}
 ``` {.python}
 %%R -i df
 library("ggplot2")
 ggplot(data = df) + geom_point(aes(x = X, y = Y, color = Letter, size = Z))
 ```
-
-::: {.output .stream .stderr}
-    C:\Users\Marco\AppData\Local\conda\conda\envs\python3\lib\site-packages\rpy2-2.9.4-py3.6-win-amd64.egg\rpy2\robjects\pandas2ri.py:191: FutureWarning: from_items is deprecated. Please use DataFrame.from_dict(dict(items), ...) instead. DataFrame.from_dict(OrderedDict(items)) may be used to preserve the key order.
-      res = PandasDataFrame.from_items(items)
-:::
-
-::: {.output .display_data}
-![](7d03ea06cc5a2be89de49cf90faff680e9b93dfa.png)
-:::
 :::

tests/notebooks/mirror/ipynb_to_pandoc/convert_to_py_then_test_with_update83.md

@@ -1,22 +1,26 @@
-::: {.cell .code execution_count="1" scrolled="false"}
+---
+jupyter:
+  kernelspec:
+    display_name: Python 3
+    language: python
+    name: python3
+  nbformat: 4
+  nbformat_minor: 2
+---
+
+::: {.cell .code}
 ``` {.python}
 %%time
 
 print('asdf')
 ```
-
-::: {.output .stream .stdout}
-    asdf
-    CPU times: user 132 µs, sys: 57 µs, total: 189 µs
-    Wall time: 188 µs
-:::
 :::
 
 ::: {.cell .markdown}
 Thanks for jupytext!
 :::
 
-::: {.cell .code collapsed="true"}
+::: {.cell .code}
 ``` {.python}
 ```
 :::

tests/notebooks/mirror/ipynb_to_pandoc/frozen_cell.md

@@ -1,12 +1,18 @@
-::: {.cell .code execution_count="1" ExecuteTime="{"start_time":"2018-10-17T10:31:56.157308Z","end_time":"2018-10-17T10:31:56.160823Z"}"}
+---
+jupyter:
+  kernelspec:
+    display_name: Python 3
+    language: python
+    name: python3
+  nbformat: 4
+  nbformat_minor: 2
+---
+
+::: {.cell .code}
 ``` {.python}
 # This is an unfrozen cell. Works as usual.
 print("I'm a regular cell so I run and print!")
 ```
-
-::: {.output .stream .stdout}
-    I'm a regular cell so I run and print!
-:::
 :::
 
 ::: {.cell .code deletable="false" editable="false" run_control="{"frozen":true}"}