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Update: Updates README.md with latest Docker image #98

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merged 6 commits into from
Nov 17, 2023

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tanubrata
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Description:

  • Updates README.md with the link of latest stable JaBbA docker container and documentation on adding CPLEX to an existing container.

@tanubrata tanubrata self-assigned this Nov 15, 2023
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@shihabdider shihabdider left a comment

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This is actually a good opportunity to fix another bug I found related to package installation. Basically, the copynumber package is no longer hosted on Bioconductor and needs to be installed from source the same way that sequenza is. Here is the url to the source file: https://www.bioconductor.org/packages/3.14/bioc/bin/macosx/contrib/4.1/copynumber_1.34.0.tgz

Please update the DESCRIPTION file to install from that url instead of from Bioconductor.

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Ok, I have updated path for copynumber package with the source binary file. The one you pointed seems to be only for macosX, but I have added the binary. Looks good, let me know if there's anything else.

@shihabdider shihabdider merged commit b4d4b01 into mskilab-org:master Nov 17, 2023
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2 participants