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read-all

read-all #117

Workflow file for this run

name: Integration
on: [push, pull_request]
jobs:
test:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ubuntu-20.04, ubuntu-22.04, macos-12]
fail-fast: false
steps:
- uses: actions/checkout@v3
- name: Install Ubuntu dependencies
if: startsWith(matrix.os, 'ubuntu')
run: |
sudo apt update
sudo apt install -y build-essential cmake qtbase5-dev libblas-dev liblapack-dev
sudo apt install -y libopenblas-dev mesa-common-dev libgl1-mesa-dev libglu1-mesa-dev
sudo apt install -y libvtk7-dev openmpi-bin libopenmpi-dev
sudo apt install -y lcov
- name: Install MacOS dependencies
if: startsWith(matrix.os, 'macos')
run: |
brew install cmake vtk openblas lapack mesa open-mpi qt
brew install lcov
sudo ln -s /usr/local/opt/qt5/mkspecs /usr/local/mkspecs
sudo ln -s /usr/local/opt/qt5/plugins /usr/local/plugins
- name: Build svFSIplus
run: |
mkdir build
cd build
cmake -DENABLE_COVERAGE=ON -DENABLE_ARRAY_INDEX_CHECKING=ON ..
make -j2
- name: Install test dependencies
run: |
conda create -n svfsiplus python=3.9
conda run -n svfsiplus pip install pytest pytest-cov pytest-mock numpy meshio pandas
- name: Run integration tests
run: |
git lfs pull
cd tests
conda run -n svfsiplus pytest -rPv --durations=0
- name: Generate code coverage
if: startsWith(matrix.os, 'ubuntu-22.04')
run: |
cd build/svFSI-build
make coverage
- name: Save coverage report
if: startsWith(matrix.os, 'ubuntu-22.04')
uses: actions/upload-artifact@v3
with:
name: coverage_report
path: build/svFSI-build/coverage
- name: Upload coverage reports to Codecov
if: startsWith(matrix.os, 'ubuntu-22.04')
uses: codecov/codecov-action@v3
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}