Files and code associated with Nelsen et al. 2021 FEMS Microbiology Ecology https://doi.org/10.1093/femsec/fiab072
FOR MOST PEOPLE, WHAT YOU WILL WANT TO USE ARE THE FOLLOWING FILES IN THE ANALYSIS/FILES FOLDER, CSV_FILES_ETC & ALGAL_TREES/ALIGNMENT SUBFOLDERS, RESPECTIVELY:
Accessions and other info: MASTER_accession_list_INFOADDED_MODIFIED.csv
MCC tree all OTUs: burnin25pcn_resampevery20k_mcc_medhts.tre
MCC tree used for l1ou: Nelsen_ladderized_2state.tre
100 trees from posterior used for l1ou: burnin25pcn_resampevery20k_OTUs_renamed_bioclim_retained_100randomlyselected_MODIFIED.trees
Alignment: infile.txt