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ACTIONetExperiment (ACE) Package

ACTIONetExperiment is the extension of SummarizedExperiment class specifically designed to match the structure of Python AnnData objects. It is originally developed to accompany the ACTIONet R package.

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Installation

Setting Up the Environment (Preinstallation)

For Linux Users

sudo apt install libhdf5-dev

For Mac Users

brew install hdf5

Installing ACTIONetExperiment

install.packages("devtools")
devtools::install_github("shmohammadi86/ACTIONetExperiment")

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  • R 96.1%
  • C++ 3.9%