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Very cool project! Just happened across this randomly and gave it a go locally.
I made some changes to align the deployment that make it a bit more approachable for self hosting (less helpful for actual development though).
As your comments suggested, I removed birdnetserver's exposed ports and just used the docker network. I bound both the frontend and backend to the loopback address which will be more generalized that having to add in the user's local IP. I removed some env variables that have sane defaults (though this is where its less ideal for development). Take from this whatever you think is useful.
Thanks for creating this project! I hope to deploy it on a raspi in the future!