Lesionwise metrics for Competitions

.github/workflows/python-test.yml

@@ -100,6 +100,10 @@ jobs:
       if: steps.changed-files-specific.outputs.only_modified == 'false' # Run on any non-docs change
       run: |
         pytest --cov=. --cov-report=xml --cov-append -k "transunet"
+    - name: Run Competition Lesionwise unit tests
+      if: steps.changed-files-specific.outputs.only_modified == 'false' # Run on any non-docs change
+      run: |
+        pytest --cov=. --cov-report=xml --cov-append -k "lesionwise"
 
 
     - name: Upload coverage

GANDLF/cli/__init__.py

@@ -7,6 +7,22 @@
 from .post_training_model_optimization import post_training_model_optimization
 from .generate_metrics import generate_metrics_dict
 from .data_split_saver import split_data_and_save_csvs
+from .generate_Competition_metrics import generate_metrics_dict_competition
+
+__all__ = [
+    "patch_extraction",
+    "main_run",
+    "preprocess_and_save",
+    "config_generator",
+    "deploy_targets",
+    "mlcube_types",
+    "run_deployment",
+    "recover_config",
+    "post_training_model_optimization",
+    "generate_metrics_dict",
+    "split_data_and_save_csvs",
+    "generate_metrics_dict_competition",
+]
 
 from datetime import date