Please note that the BEES R User Group has been superseded by the Environmental Computing initiative:
http://environmentalcomputing.net/
Checkout the website for tutorials as well as the calendar for upcoming sessions. The same mailing list is still in use:
https://www.lists.unsw.edu.au/mailman/listinfo/bees-ecocomp
Cheers, and hope to see you at the sessions!
/OLD INFORMATION/
## BEES R User Group
Informal style tutorials on data analysis in the R language, as well as general ecological computing,
run out of the Centre for Ecosystem Science:
http://www.ecosystem.unsw.edu.au/
Get on the mailing list for extra material and updates:
https://www.lists.unsw.edu.au/mailman/listinfo/bees-ecocomp
### When?
*alternate Fridays 12-1pm in rm 640 of the Biology building*
#### Upcoming sessions:
Up until the end of the year, there will be weekly reading groups leading up to the Eco-stats conference:
http://eco-stats15.blogspot.com.au/
We need more future sessions!!! Please volunteer!!!
#### Past sessions:
25 September: Ecostats lab on survival analysis - Loic T
http://eco-stats.blogspot.com.au/2015/09/analysis-of-ordinal-data-in-ecology.html
28 August: Ecostats lab on survival analysis - Gordy P
http://eco-stats.blogspot.com.au/2015/08/time-to-event-analysis-survival-analysis.html
31 July: Ecostats lab on time-series forcasting - Jakub S
http://eco-stats.blogspot.com.au/2015/07/forecasting-with-time-series-data.html
24 July: R Troubleshooting Session
Come along and share your problems, and see if we can solve them...
10 July: Intro to Git (version control) - Will C
1/3 July: Workshop on LM/GLM/GLMM with freqentist and bayesian inference
June 19: Eco-stats lab on Bayesian Ordination and Regression AnaLysis - Francis H
http://eco-stats.blogspot.com.au/2015/06/its-boral-time.html
29 May: Eco-stats session on missing data analysis - Firouzeh N
http://www.eco-stats.blogspot.com.au/2015/05/missing-data-analysis.html
5 June: Sharing your knowledge (with R Markdown) - Alistair P
8-12 June : no lab due to PRF week
15 May: Using the data.table package - Ned H
https://github.com/mitchest/BEES-ecocomp/blob/master/data.table.tutorial.Rmd
1 May: R Troubleshooting Session
Come along and share your problems, and see if we can solve them...
24 April: Zero inflation in Ecology - Ecostats session with Gordy P
http://www.eco-stats.blogspot.com.au/2015/04/zero-inflation-in-ecology.html
17 April: writing functions - Mitch L
https://github.com/mitchest/BEES-ecocomp/blob/master/intoToFunctions.R
27 March: Species traits in multivariate analysis - Ecostats session with David W
http://www.eco-stats.blogspot.com.au/2015/03/species-traits-in-multivariate-analysis.html
20 February: R coding 101 - Mitch L
https://github.com/mitchest/BEES-ecocomp/blob/master/RScripting101.R
5 December: Distance-based statistics in R (with Vegan) - Shaun N
https://github.com/mitchest/BEES-ecocomp/tree/master/vegan
28 November: Eco-stats lab on LM/GLM/GLMM with R2jags - Andrew L
http://www.eco-stats.blogspot.com.au/2014/11/generalised-linear-mixed-models-with_25.html
21 November: CANAPE (Categorical Analysis of Neo and Palaeo Endemism) with Biodiverse - Shawn L
http://biodiverse-analysis-software.blogspot.com.au/2014/11/canape-categorical-analysis-of-palaeo.html
7 November: BEES end-of-year party, yiew!
31 October: Inference with spatially correlated data (with mixed effects models) - Ecostats session with Gordana P
http://eco-stats.blogspot.com.au/2014/10/r-lab-inference-with-spatially.html
10 October: Raster and Vector handling in R - Nick M
https://github.com/mitchest/BEES-ecocomp/tree/master/Rasters
26 September: Break due to school holidays
12 September: Plotting in R with the ggplot2 package - Ned H
https://github.com/mitchest/BEES-ecocomp/blob/master/ggplot_tutorial.Rmd
29 August: Mixed modelling - Ecostats session with Francis H
http://eco-stats.blogspot.com.au/2014/08/r-lab-on-mixed-models-in-ecology.html
1 August: Advanced streamlined data manipulation in R with dplyr - Eve S
Tutorial by Hadley Wickham:
http://rpubs.com/hadley/dplyr-intro
Additional excercises:
https://github.com/mitchest/BEES-ecocomp/blob/master/dplyr.R
4 July: Break due to conferences, school holidays, semester break etc.
18 July: Break due to conferences, school holidays, semester break etc.
20 June: regex - Andrew L
https://www.dropbox.com/s/k0kxzoktqvtn95l/regex_tutorial.pdf
<img src="andy.JPG" width="200">
6 June: HPC with Katana - Mitch L
https://www.dropbox.com/s/2c41r47qzgenl11/Katana.pdf
<img src="mitch.jpg" width="200">
23 May: writing functions - Mitch L
https://github.com/mitchest/BEES-ecocomp/blob/master/intoToFunctions.R
9 May: version control with git - Will C
http://wcornwell.github.io/versionControl/git_intro.html#1
<img src="will.JPG" width="200">
4 April: basic data manipulation in R - Andrew L
https://github.com/mitchest/BEES-ecocomp/tree/master/subset
15 March: loops and logical operators in R - Mitch L
https://github.com/mitchest/BEES-ecocomp/blob/master/introToLoops.R
### Sharing
Generally, any code up here is freely usable and distributable without prejudice (under CC BY), unless it is stated that it has come directly from another source
